Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00414 ATGTGTTTCAGACCACGCTGCAGCTTCTGCTACATCTTTATCACACTTTACACCCTTATGTTCATCTTCATACTTTCCTTGATCCTCTTCTGGATAATCATATCTCCATCAAGTGTGAAGTTCCACGTAACTGGTGCCTCTCTAACACAGTTCAACCTCATCACAAGCAACAACACCTTGTATTACAACTTCAAGGTCAACGTCACAGTGAGAAATCCCAACAACAACATCGTAGTGTACTATAGGAAGATCACAGCAATAGCTTGGTACAAAGATAATGCTTTTGGTTGGGTGAGCCTAACACCCTTTGACCAAGGCCACAGGAACACCACCTTTCTTCAAGCAGTGTTTGTAGGGCAAAGGGTGATTAAGCTCAAACCTCAACAACTTGGTGAGTATAAAGAAGAGACAAATGCTGGGATTCACAAGGACTTAGCTGTGGATTTTGATCTTAATATCAGAGCCAAGTATGCAAGGTTCAAGAGTAGTCGTTTCAATCCACCCATTGTTCAGTGTCGTCGCTTAAAAGTTCCTTTCATCTCTAATGGCAAATCAGAACCTCCTTTTACTGTCACCAGATGCAGCAGTGCCTATTTCTTTTCTGATCGTGATGCTGATGCATAG 624 0.4215 MCFRPRCSFCYIFITLYTLMFIFILSLILFWIIISPSSVKFHVTGASLTQFNLITSNNTLYYNFKVNVTVRNPNNNIVVYYRKITAIAWYKDNAFGWVSLTPFDQGHRNTTFLQAVFVGQRVIKLKPQQLGEYKEETNAGIHKDLAVDFDLNIRAKYARFKSSRFNPPIVQCRRLKVPFISNGKSEPPFTVTRCSSAYFFSDRDADA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00414 207 Pfam Late embryogenesis abundant protein 67 162 IPR004864 -
Viun4g00414 207 PANTHER OS05G0367900 PROTEIN 6 178 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00414 Viun-Chr4 2781652 2782518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00414 33 179 SNARE and Associated Proteins AT1G32270 29.932 3.13e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00414 - - gmx:100784278 364.77