Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00413 ATGTGTTGCAGAAACCGTTGCATAAGTTGCATTTGCGGCACAATCATCACGCTCATATTCTTGTTCATAGTTTCCTTAATCATCTTCTGGATAATAATCTCTCCATCAAACGTGAAGTTTCATGTAACTGATGCCTCTCTCACACAATTCAACCTCACAAACAACAACACCTTGTACTACAACTTCAAGGTCAACGTCACAGTGAGAAACCCCAACAACAACATCGTAGTGTATTATAGGAGGATCAAAGCGATAGCTTGGTACAAAGACAACGATTTTGGTCGGGTAAACTTAACACCCTTTGACCAAGGCCACAAGAACACCACCGTCCTTCAAGTGTTGTTTGAAGGGCAAAGCGTGCTTAAGCTCAGATCTCAACAACTTGGTGAGTATAAAGAAGAGACAAGTGCCGAGGTTTACAATGACATGGCCGTGGATTTTGATCTCAGAATCAGAGCCAAGTTTGGAAAGTTCAAGAGTAGTCGTTTCGATCCTCCCATTGTTCAGTGTCGGCGTTTGAGTGTTCCTTTGATTTCAAAGGCTAAATCGTTACCTTCTTTTACTGTCAGCAACTGCAGAATTGGTCGTTCTTTCTTTGTTGATCGTGATGCTGAAGCTGCATGA 624 0.4215 MCCRNRCISCICGTIITLIFLFIVSLIIFWIIISPSNVKFHVTDASLTQFNLTNNNTLYYNFKVNVTVRNPNNNIVVYYRRIKAIAWYKDNDFGRVNLTPFDQGHKNTTVLQVLFEGQSVLKLRSQQLGEYKEETSAEVYNDMAVDFDLRIRAKFGKFKSSRFDPPIVQCRRLSVPLISKAKSLPSFTVSNCRIGRSFFVDRDAEAA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00413 207 Pfam Late embryogenesis abundant protein 65 160 IPR004864 -
Viun4g00413 207 PANTHER OS05G0367900 PROTEIN 7 176 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00413 Viun-Chr4 2776199 2776944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00413 32 177 SNARE and Associated Proteins AT1G32270 31.973 9.81e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00413 - - gmx:100783747 301.597