Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00409 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAAAAATCCGATTCCTCTAGTCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCCTCCAATTCTCCTTCCAGATCCGACAAGAAGAAGGCTAAATCCGCCGCTCATCCAACTTTAGCAGCGGGAGGCGGCGGTGGAAGCGGCGGTGGGGGAGCTCTTGCTGCGTGTCGTCAGACGCAGGTGAAGGACGGGACCAAGAAGAAGGATGTGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGAGGCTCGCAAGGATTCTCCGGTGAAGAAGTTGACGGCGGCGGAGGGACGCGAATCGTCGGCGTCAGTGTCGCCGATTCTGGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGGCCGCTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGAACGACGGCGCTCGGCGGCAGCAACCTTTCCCGGCCCGGCGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAACCGGCCAGCCAGAACCGGGTCGGATTTCGTGAGGGTTCCCGTGGCGGTGCCGCTGCTACCGGAGGTTGGGGCGATAATGGGAGCAATTCTGACAGCGTGTCGACTTCGGGGAGTATGCCGCTAAGGGAGCAGAGTCCGGTGGTGTTGCCTCGGTCGCGGTTGCAGAACGGAGAATCGTCCTCGGAAGCCGCAGGCAAACAGGCATCATCATGGGCCCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCAGAGACGGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGCTTTCAAGCCATATTACGTGTCACTAGTGCACCTAGGAAGAGGTTTCCTTCGGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGGCGGTTGAATAACCTTGAGGAGATTTTGGTCGTTATTAGGGCAAAATTTGATAAAGCGAAGGAAGATGTAAACTCTGATTTAGCCATTTTTGCGGCAGATCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCAAGGAGCTGTGCTATGACTTCATCTGGCGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCTCCTGGGATGCTAAAGCAGCTTCACACCCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTGTTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTTCGTCAATCAAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAAGTTCAAGTGCTGCAAAAGCCTTAAAGCCTTCATCTAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCGGAAAATCTTTCACTTCCTGCTGATGATGATAATACAAAACATTTTGACTCTTCAGGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCATCTCCGTCTGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGAACAAAATTATGGGAGGGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCCCTTCTGATGTGGACCTTTCTACCGCGAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGCTTCCAAACACCAACATAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGCGAGGAGAACTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACACGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAAGGACTGAGTGTCAATGATCGTCTTGTCAGAATTGCTGAAACACTAGAAAAGATGATGGAGTCTTGTTCACAAAAGGATACCCAACAAATGGTGGGAAGTCCCGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGATGACATGCTAGACTGTTTCCCCGAAACCGATAATTCTGCTTTTATGGATGACTTGAAAGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCAAGGTCACCATTGATGACACCACGGACAAGTCCCATTGACTTGCTCTTGGCCGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGATGAATGAACTTGCGGATATAGCTCGATGTGTGGCAAATGCACCTCTGGATGATGATCGCACAACTTCATATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAACTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACCGTTGATGATGATGTTCTCTTGGAAGATGACGTGGTTCGTAGCTTGAGAACAAGCCCAATCCATTCATCAAGGGATCGTACCTCTATTGATGACTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGGAGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAAAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAATCCTTTTGTGGTTCGATTCTTCTATTCTTTTACATGTCGTGAAAACTTATATCTCGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGAAATTTAGGTTGCCTAGATGAGGAAGTTGCTCGAGTATATATTGCTGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCTCTGCGTGTGGTTCATCGAGATCTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAGGATGAGACTGATGTATTTACTTCTGAGGATCAATGGGAAAGGAGGAAGAAACGCTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCTGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTTCAGTTCCTGCAGAGATGAGTCCCGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTGGGATCAAAAGGAGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGCGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCCAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGTGGTCTTGCTGAGTTTGATTCTGGCACATCTGTCAATTACTCTTTCAGTAATTTCTCCTTCAAGAATCTCTCCCAGCTTGCATCTATCAACTATGATCTCACTAAAGGATGGAAAGACGACCCGCCAACGAATTCTAGTGCATAG 3897 0.4578 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGGGGSGGGGALAACRQTQVKDGTKKKDVVKGKESQTPPPEARKDSPVKKLTAAEGRESSASVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEPASQNRVGFREGSRGGAAATGGWGDNGSNSDSVSTSGSMPLREQSPVVLPRSRLQNGESSSEAAGKQASSWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKALKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSGRDRMASWKKFPSPSGKSPKEAAQLKEQNYGRVESSKASNNKRFPSDVDLSTAKPSEFLPIKDSLDHASKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNDRLVRIAETLEKMMESCSQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSDDMLDCFPETDNSAFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSPIDLLLAGKGAYSEHDDLLQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVFTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPSVPAEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00409 1298 MobiDBLite consensus disorder prediction 71 103 - -
Viun4g00409 1298 SUPERFAMILY Protein kinase-like (PK-like) 884 1215 IPR011009 -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 1 251 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 731 753 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 9 32 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 452 562 - -
Viun4g00409 1298 Pfam Protein kinase domain 887 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00409 1298 FunFam probable serine/threonine protein kinase IREH1 885 974 - -
Viun4g00409 1298 CDD STKc_MAST_like 893 1181 - -
Viun4g00409 1298 SMART serkin_6 887 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00409 1298 Gene3D Phosphorylase Kinase; domain 1 885 1205 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 656 687 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 221 249 - -
Viun4g00409 1298 Gene3D Transferase(Phosphotransferase) domain 1 971 1194 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 502 518 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 1226 1243 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 656 694 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 108 127 - -
Viun4g00409 1298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1006 1018 IPR008271 GO:0004672|GO:0006468
Viun4g00409 1298 ProSiteProfiles Protein kinase domain profile. 887 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00409 1298 MobiDBLite consensus disorder prediction 459 482 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 542 560 - -
Viun4g00409 1298 PANTHER SERINE/THREONINE-PROTEIN KINASE 582 1270 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 1221 1244 - -
Viun4g00409 1298 MobiDBLite consensus disorder prediction 195 214 - -
Viun4g00409 1298 Coils Coil 315 335 - -
Viun4g00409 1298 ProSiteProfiles AGC-kinase C-terminal domain profile. 1177 1281 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00409 Viun-Chr4 2726212 2741487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00409 1 1292 AGC Kinase Gene Family AT3G17850 66.063 0.0 1624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Viun4g00409 Pkinase 4.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00409 - - gmx:100776995 2251.48