Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00351 ATGGCTAGTGTTGTGACAGAGAAAGTGAAGCTTCTTGTGGCATTACTTACCCTTCAGCTCTGCTTTGCAGGATATCACATTGTGTCTAGACTTGCACTAAATATTGGAGTCAGCCAAGTTGTTTACCCCGTTTATCGAAATTTGATTGCTTTGCTTTTGCTAAGCCCATTTGCTTATGTGTTAGAGAAGAATCAAAGACCACCCCTCACTTTATCTTTACTGGTTCAGTTCTTCCTACTTGCATTGCTGGGGATCACAGCAAACCAAGGGTTTTACTTGTTGGGATTATACTATGCTTCTCCAACTTTTGCTTCTGCATTGCAAAACTCAGTTCCTGCAATCACTTTTGTATTGGCTTTGGCTTTAAGGCTTGAGGAAGTCAACATCACAAGGAGAGATGGATTGGCAAAAGTTCTTGGAACCATTGCTAGTGTGGGGGGTGCCACAGTAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACCTGCAGATGGACCTAACACAAGGAGACACTTTAGAAGTAGATCAATCAACAAAAACTCAAAATTGGACTTGGGGCTGCATATACTTGCTTGGACATTGTCTGTCATGGGCTGGTTGGATAGTTTTTCAGGCTCCTGTGGTGAAGAATTATCCAGCAAAACTAACCCTCACTTCGTTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTTGCAGAAGATGACTTGGAGAATTGGAAGATACAGTCACTGGAAGAGCTTTTTATCATCCTATATGCTGGAATTATAGCATCTGGTGTTGTCATATCTCTCCAAACATGGTGCATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTGTTCCAGCCTGTGCAAACTATTCTAGTTGCTGTCATGGCAGCTCTAATTCTTGGTGATCAGTTATACTCAGGAGGGCTTATTGGTGCAGTTCTCATTGTGCTTGGTCTATACTTAGTCCTATGGGGCAAAACCAACGAAAAAAAAGTGACCGAGTCATCATCATCACTAACAAACCCCTTGCTTAAGGCAGAGGAAGAGAATAAAGAAACTGATGCAGCTTCCAAAGACATACCATGA 1086 0.4199 MASVVTEKVKLLVALLTLQLCFAGYHIVSRLALNIGVSQVVYPVYRNLIALLLLSPFAYVLEKNQRPPLTLSLLVQFFLLALLGITANQGFYLLGLYYASPTFASALQNSVPAITFVLALALRLEEVNITRRDGLAKVLGTIASVGGATVITLYKGPPLLHLQMDLTQGDTLEVDQSTKTQNWTWGCIYLLGHCLSWAGWIVFQAPVVKNYPAKLTLTSFTCFFGLIQFLIIAAFAEDDLENWKIQSLEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVAVMAALILGDQLYSGGLIGAVLIVLGLYLVLWGKTNEKKVTESSSSLTNPLLKAEEENKETDAASKDIP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00351 361 MobiDBLite consensus disorder prediction 333 361 - -
Viun4g00351 361 PANTHER WAT1-RELATED PROTEIN 12 336 IPR030184 GO:0016020|GO:0022857
Viun4g00351 361 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Viun4g00351 361 Pfam EamA-like transporter family 14 152 IPR000620 GO:0016020
Viun4g00351 361 MobiDBLite consensus disorder prediction 345 361 - -
Viun4g00351 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Viun4g00351 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00351 Viun-Chr4 2231840 2234156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00351 4 355 Nodulin-like Gene Family AT3G18200 67.787 1.69e-177 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00351 - - vra:106768622 654.44