Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00350 ATGCTCAAAAGCATTTGCATAGGAATGTTCTTTCTGCAGGATTACCACTATGATGCAAAGGCAACTAAACGATCTATTCTGAATGGTTTCCTTAAAACTGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGAGGATGGCAGGATGGGGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAAAGTTGCGGTTGCTCATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCTCAAAATCCAGATGGTGTCCAGGCACTGAAGGCCATTGTTCTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTACACGCATTCAGAAGTCAGGGGGGTTCGTGAGTCCAGATGGACGATTATTAGGGCGTCTTGAAGTTTCTAGAGCTTTTGGAGATCGCCAGTTTAAAAAGGTAGGACTTGTTGCAAGCCCGGATGTCTATACTTTTGAAGTTACAGATACTGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGCGATGCTGTTGATTTTGTTCAGAAATTATTGAATGAGGGGCTACCTGTTGCCACCGTGTGCCGTCGTCTTGTAAGGGAGGCTGTCCGTGAGCGTCGCTGTAAAGATAACTGCACTGCCATTATTATTGTATTTAAGCACAAATAA 669 0.4514 MLKSICIGMFFLQDYHYDAKATKRSILNGFLKTDESLLQESAEGGWQDGATAVCVWVLGQKVAVAHIGDAKAVLARSTDGSQNPDGVQALKAIVLTREHKPIFPLERTRIQKSGGFVSPDGRLLGRLEVSRAFGDRQFKKVGLVASPDVYTFEVTDTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVCRRLVREAVRERRCKDNCTAIIIVFKHK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00350 222 ProSiteProfiles PPM-type phosphatase domain profile. 1 219 IPR001932 -
Viun4g00350 222 SUPERFAMILY PP2C-like 14 220 IPR036457 -
Viun4g00350 222 Gene3D - 8 222 IPR036457 -
Viun4g00350 222 Pfam Protein phosphatase 2C 21 207 IPR001932 -
Viun4g00350 222 PANTHER PROTEIN PHOSPHATASE 2C 25 217 IPR015655 GO:0004722|GO:0006470
Viun4g00350 222 SMART PP2C_4 3 217 IPR001932 -
Viun4g00350 222 CDD PP2Cc 23 219 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00350 Viun-Chr4 2225256 2229677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00350 18 171 PP2C-type Phosphatase Gene Family AT1G18030 66.879 7.76e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00350 K17500 - gmx:100815852 361.303