Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00349 ATGAGCGAAAGCTCACAGGCCCAGAAGCGTGAATCTGCCGATTCACAGGGCGAGAAGGATGGTGTTGCATCCAAGAAGCCAAAGATTGAGTCTTGTGCAAAGGGTTCCGATGATAATGGTGTAAAGGAGCCATCTTTCCTCATCGAAGCAGATGCCGCCGAAGACAAGGGCTCGAGGCTCACCATGGAGGATGCATGGGTCGTGCTTCTCGATGCAAGTTTAGATTATCCTGGGAAATTGAGATGTGCACATTTTGCAATTTATGATGGACATGGAGGGCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATAGGAATGTTCTTTCTGCAGGATTACCACGTGAGTTGTATGATGCAAAGGCAACTAAACGATCTATTCTGAATGGTTTCCTTAAAACTGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGAGGATGGCAGGATGGGGCTACAGCCGTATGTGTTTGGGTATTGGGACAAAAAGTTGCGGTTGCTCATATAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCTCAAAATCCAGATGGTGTCCAGGCACTGAAGGCCATTGTTCTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTACACGCATTCAGAAGTCAGGGGGGTTCGTGAGTCCAGATGGACGATTATTAGGGCGTCTTGAAGTTTCTAGAGCTTTTGGAGATCGCCAGTTTAAAAAGGTAGGACTTGTTGCAAGCCCGGATGTCTATACTTTTGAAGTTACAGATACTGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGCGATGCTGTTGATTTTGTTCAGAAATTATTGAATGAGGGGCTACCTGTTGCCACCGTGTGCCGTCGTCTTGTAAGGGAGGCTGTCCGTGAGCGTCGCTGTAAAGATAACTGCACTGCCATTATTATTGTATTTAAGCACAAATAA 972 0.465 MSESSQAQKRESADSQGEKDGVASKKPKIESCAKGSDDNGVKEPSFLIEADAAEDKGSRLTMEDAWVVLLDASLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELYDAKATKRSILNGFLKTDESLLQESAEGGWQDGATAVCVWVLGQKVAVAHIGDAKAVLARSTDGSQNPDGVQALKAIVLTREHKPIFPLERTRIQKSGGFVSPDGRLLGRLEVSRAFGDRQFKKVGLVASPDVYTFEVTDTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVCRRLVREAVRERRCKDNCTAIIIVFKHK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00349 323 CDD PP2Cc 53 320 IPR001932 -
Viun4g00349 323 ProSiteProfiles PPM-type phosphatase domain profile. 49 320 IPR001932 -
Viun4g00349 323 PANTHER PROTEIN PHOSPHATASE 2C 23 318 IPR015655 GO:0004722|GO:0006470
Viun4g00349 323 Pfam Protein phosphatase 2C 54 308 IPR001932 -
Viun4g00349 323 SMART PP2C_4 35 318 IPR001932 -
Viun4g00349 323 MobiDBLite consensus disorder prediction 12 37 - -
Viun4g00349 323 Gene3D - 25 323 IPR036457 -
Viun4g00349 323 MobiDBLite consensus disorder prediction 1 41 - -
Viun4g00349 323 SUPERFAMILY PP2C-like 46 321 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00349 Viun-Chr4 2225254 2229677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00349 46 272 PP2C-type Phosphatase Gene Family AT1G18030 72.174 7.08e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00349 K17500 - gmx:100815852 552.362