Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00323 ATGAAGACTATTCGTGTTCTGCAGTTTCCTTCTTCCTTCTTCCTTCCTTTTTCTCATCTTTGTACACATATTTCATTTTCACTGCTGTTGTTTACGCTTACATGTTCCTCTCAGTGGACAAGTAGAACTTTGCATGTCACTAAGGTTGCTTTGCATGCTGTGGTGCTCACTGCATCACTTCATCTCACTGGCAGAGCACTCTTGGAAAAGCATTCCAATGGCCCTCTGAGGTTTTTTAATTGCCTTATGAGAATGAGGTGTAATCTCTTTGAGGGCTGCTTCACCAGCTCTTCTGACACATTTCCAAAGCAGAGTAAATGGAAAATCTTGCCCTACAAGAAACTTGCAAAAGTCACAGATAACTTCGATCAATCTCATTGTCTTGGAAAAAGAGGCTTTGCCACTGAATATTACGGAAAACTTGCGGATGGGCGTGAGATTACAATCCAGTGCTTCAACGAAGACAAGCACCACATTCTGCAACAGTTTATCAATGAAACTACTATCCTAAATTACTTGCCTCACAAAAATATTGTGTCAATTTATGGATGTGCTTCTCATCACGAGAAATCTATGCTAGTCCATGAATACTTATCCAATGGAAATCTTGCTGCTCATCTTAAAACTGAAGACGAAAACAGCAAAATTTCTTGGCTGACACGATTTGATGTAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTGTTATGGCATCATCCACCGAAATGTGAAGTCCAGTAACATTCTCCTAGATGTGCACTTTTCTGCTAAACTTGCAAACCTTCATTTATCATGCAAACTTCCAGATGGAGTTCCTGTCTATGCCGCCCATGTTACCAATGATATAATTGGAACATGTGGTTACATCGACCCAGATTATTTGACAAAAGGCCAGCTTAGTGTAAAAAACGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGGGTTCTGAAAGAGGAGGACGATCTTGCTACACTTTTAAGAACAAAAATTGAAAAGCAAGCTGTGGTGGAGCTCTTGGATCCAACACTTGACTTCCAATCTAACCTTAAGATCAAGAGAATGATGACTGCTACAGCTGAGCTTGCACTTTTGTGCATGCAATGTCCACAAGAATTAAGGCCAAGCATGGAACAGGTGCTAGAGATTCTCAAAGGTATAAAGCAAGGGAGACACGAACCAAACACAACAAAAGCTTTGAAAATCTTCCACCATGGTGAACTTGAAGAAGCTACAAACAATTTTGATACTTGCCTTGGAAAGGGAGGCTATGGCACCGTGTACTATGGAAAACTTAAGGATGGAAGAGAGGTTGCAATAAAATGTTTCCATGAAGAGAGTGAGACAGAAAAGATCATTGAGCAATTCATGAAAGAAACTGAGGTTTTGGTTTGGTTGCACCATAAAAATCTGGTTTTACTTTATGGCCGGACTTCTCGCCATAGCAACAAGCACATGCTAGTGTATGAATACATCTCCAATGGCACTCTTTCTAAACATCTTCATGACTCTTCCTGTGGTAAACTACCATGGCATACTAGATTGAACATTGCCATCGAAACTGCAACTGCATTGGTATATCTGCATGACTCAGGTATCATCCACCGAGATGTGAAAGGGAGTAACATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCAGATTTTGGATTCTCACGGTATCTCCCAGATTATGCAACGCACGTTTCCACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGGGTCTGTGACAAAAGTGATGTCTATAGTTTTGGGGTGGTTTTGTTTGAACTTATATCTTCCAACTCGCCAAGTTTAATTGAAGGCACAGATTACGTTACTCTTGCACAGTTTGCAAAGAGAAAAATATTGAACAAGGAATTGAACGCGGTAGTGGATCCAAGCTTTTGGTTTGGTGTTGACAGAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGTACTTAGACCATCCATGAAACAGGTGCTGGAGACCCTTGAGGGCATTAGAAAAGGAACATGGGGATTCAACCAGATAACATAG 2130 0.4061 MKTIRVLQFPSSFFLPFSHLCTHISFSLLLFTLTCSSQWTSRTLHVTKVALHAVVLTASLHLTGRALLEKHSNGPLRFFNCLMRMRCNLFEGCFTSSSDTFPKQSKWKILPYKKLAKVTDNFDQSHCLGKRGFATEYYGKLADGREITIQCFNEDKHHILQQFINETTILNYLPHKNIVSIYGCASHHEKSMLVHEYLSNGNLAAHLKTEDENSKISWLTRFDVAIDIANALDYLHCYGIIHRNVKSSNILLDVHFSAKLANLHLSCKLPDGVPVYAAHVTNDIIGTCGYIDPDYLTKGQLSVKNDVYSFGVVLCELLSSKLAKYWVLKEEDDLATLLRTKIEKQAVVELLDPTLDFQSNLKIKRMMTATAELALLCMQCPQELRPSMEQVLEILKGIKQGRHEPNTTKALKIFHHGELEEATNNFDTCLGKGGYGTVYYGKLKDGREVAIKCFHEESETEKIIEQFMKETEVLVWLHHKNLVLLYGRTSRHSNKHMLVYEYISNGTLSKHLHDSSCGKLPWHTRLNIAIETATALVYLHDSGIIHRDVKGSNILLDENFTVKVADFGFSRYLPDYATHVSTIPVGTRAYIDPDYYESGRVCDKSDVYSFGVVLFELISSNSPSLIEGTDYVTLAQFAKRKILNKELNAVVDPSFWFGVDRNMMEMITAVAELAFQCVQCPKVLRPSMKQVLETLEGIRKGTWGFNQIT 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00323 709 ProSiteProfiles Protein kinase domain profile. 122 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00323 709 Pfam Protein kinase domain 127 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00323 709 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 409 702 IPR044652 GO:0004672
Viun4g00323 709 FunFam Wall-associated receptor kinase 3 503 709 - -
Viun4g00323 709 Gene3D Phosphorylase Kinase; domain 1 95 197 - -
Viun4g00323 709 Gene3D Phosphorylase Kinase; domain 1 415 502 - -
Viun4g00323 709 SMART serkin_6 424 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00323 709 SMART serkin_6 122 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00323 709 FunFam LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 isoform A 94 197 - -
Viun4g00323 709 Gene3D Transferase(Phosphotransferase) domain 1 503 703 - -
Viun4g00323 709 Gene3D Transferase(Phosphotransferase) domain 1 198 414 - -
Viun4g00323 709 Pfam Protein tyrosine and serine/threonine kinase 427 693 IPR001245 GO:0004672|GO:0006468
Viun4g00323 709 SUPERFAMILY Protein kinase-like (PK-like) 406 699 IPR011009 -
Viun4g00323 709 SUPERFAMILY Protein kinase-like (PK-like) 99 395 IPR011009 -
Viun4g00323 709 ProSiteProfiles Protein kinase domain profile. 424 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00323 709 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Viun4g00323 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00323 Viun-Chr4 1954269 1957999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00323 411 699 Receptor kinase-like Gene Family AT1G25390 52.881 7.43e-90 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun4g00323 PK_Tyr_Ser-Thr 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00323 - - vun:114181918 1420.6