Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g00313 | ATGGTTAATGCGCCATTTAGCATGAATGCTTCTGTTAATTTCACTGGCTCATTGAGAATGAATTACATTGAGATTTTGAAGATGGGGTTTCTTTTGAATTGGACTGCACCTGATTGCGAGTACTGTGAGAAAAGTGGTGGACGTTGTGGATTTGATGGCAATCAGTTTCTCTGTTTCTGCAAGGATAAGTCCTACTTAAAAAGTTGTGGTAGTGGTAATAATATATTTCGAAATACTCTGATCATTTTTTTGGCTGTTCATTCAGATCTCTGTGGCGCTTCTGCTCCTTTCATGTTTTATTTCCCCATTCCCTCTTTTGGGTGCAGACGCAATTTCAATTCTACAATGCCATTCCAAATAAGGAATCGGGACCAAAAGAGGATAATAATTATTTTAGGTCTTGCAAGTGCAGCAATGGGAATGTTTATGATATGCCTCATAATAAACTGTAGAAAATGTATGTCATCAATAAGAAAGGTAAAATTTCGGATGACTAATGAGAAAGATATTGAAGTATTTTTGAAAGATCATGGAACTCTTGGACAAAAGAAATACAAATTTTCAGAAGTCAAGAAAATGACCAACAACTTCACACTTAAACTGGGTGAAGGTGGGTTTGGTGTTGTGTACAAAGGAGAGTTATGCAATGGTTACCGTGTGGCTGTAAAGATATTAAGGGCATCCAAAGGAAATGGAAAAGACTTTATGAATGAGGTTGCCAGCATCAGTAGAACTTCTCATGTTAATATTGTCCAACTTATTGGATTCTGTTTGGAAGGAAAGAAGAAAGCCCTTATTTATGAATTCATGCCTAATGGTTCCCTCGACAAGTTTATCGGTAATAAGGGACTAGAAAGCACTCCATCTTTGAGTTGGGATAATCTGTTGCAAATTGCAAAAGGGATAGCCAGAGGATTAGAGTACTTGCACAAGGGATGCAACACTCGTATTTTACATTTTGACATAAAACCACACAACATTCTTTTAGACGAGAACTTTTGTCCCAAGATATCAGATTTTGGGCTTGCAAAACTTTGTCCTGGTAAAGAGAGCACTATTTCCGTTTCAGATGCCAGAGGAACAATAGGATATGTAGCTCCAGAAATATGCAACAAGCATTTCGGTGGAGTTTCACAAAAATCTGATGTGTATAGCTATGGAATGATGCTGCTAGAAATAGTGGGAGTGAGGAACAATGTTAATGGAGAAGCCACTCAAACAAGTGAATACTTCCCGGATTGGATATACCGGAAGCTTGAGCAAGAGAATGAATTGAGAAGTGATGGTGTGATAGGCACAGAAGAAAAAGAGATAGAAAGGAGAATGATTGCGGTTAGTTTGTGGTGCATTCAAACGTTTCCAAAGGATAGACCAACTATGAGTAAAGTAATAGATATGTTAGAAGGCAACATAAATTCTGAAGAAATACCCCCAAAACCTGTTCTTTCTTCTCCCACAACTACATTGGTGGCAGAATGGACCACTAGTTCTTTGCAGTCTGGCATAAGCGTGTGCGCCATTTCTGTGAACAGATTCTACCGTCAATGTAACTGTGGCAACCCATCATACCTGCTCAGATGCTAG | 1584 | 0.3857 | MVNAPFSMNASVNFTGSLRMNYIEILKMGFLLNWTAPDCEYCEKSGGRCGFDGNQFLCFCKDKSYLKSCGSGNNIFRNTLIIFLAVHSDLCGASAPFMFYFPIPSFGCRRNFNSTMPFQIRNRDQKRIIIILGLASAAMGMFMICLIINCRKCMSSIRKVKFRMTNEKDIEVFLKDHGTLGQKKYKFSEVKKMTNNFTLKLGEGGFGVVYKGELCNGYRVAVKILRASKGNGKDFMNEVASISRTSHVNIVQLIGFCLEGKKKALIYEFMPNGSLDKFIGNKGLESTPSLSWDNLLQIAKGIARGLEYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESTISVSDARGTIGYVAPEICNKHFGGVSQKSDVYSYGMMLLEIVGVRNNVNGEATQTSEYFPDWIYRKLEQENELRSDGVIGTEEKEIERRMIAVSLWCIQTFPKDRPTMSKVIDMLEGNINSEEIPPKPVLSSPTTTLVAEWTTSSLQSGISVCAISVNRFYRQCNCGNPSYLLRC | 527 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g00313 | 527 | FunFam | PR5-like receptor kinase | 270 | 479 | - | - | |
Viun4g00313 | 527 | Pfam | Wall-associated receptor kinase C-terminal | 2 | 63 | IPR032872 | - | |
Viun4g00313 | 527 | SMART | serkin_6 | 195 | 467 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g00313 | 527 | CDD | STKc_IRAK | 201 | 469 | - | - | |
Viun4g00313 | 527 | Gene3D | Phosphorylase Kinase; domain 1 | 154 | 269 | - | - | |
Viun4g00313 | 527 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 166 | 484 | IPR045874 | GO:0004672 | |
Viun4g00313 | 527 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 317 | 329 | IPR008271 | GO:0004672|GO:0006468 | |
Viun4g00313 | 527 | FunFam | serine/threonine-protein kinase PBS1-like | 164 | 269 | - | - | |
Viun4g00313 | 527 | ProSitePatterns | Protein kinases ATP-binding region signature. | 201 | 223 | IPR017441 | GO:0005524 | |
Viun4g00313 | 527 | Pfam | Protein tyrosine and serine/threonine kinase | 198 | 467 | IPR001245 | GO:0004672|GO:0006468 | |
Viun4g00313 | 527 | ProSiteProfiles | Protein kinase domain profile. | 195 | 482 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g00313 | 527 | Gene3D | Transferase(Phosphotransferase) domain 1 | 270 | 478 | - | - | |
Viun4g00313 | 527 | SUPERFAMILY | Protein kinase-like (PK-like) | 181 | 468 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g00313 | Viun-Chr4 | 1905624 | 1911635 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g00313 | 133 | 509 | Receptor kinase-like Gene Family | AT1G66910 | 49.614 | 2.48e-125 | 379 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Viun4g00313 | PK_Tyr_Ser-Thr | 1.1e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g00313 | - | - | vun:114181925 | 1082.4 |