Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00285 ATGAATCCACCATCAATTAACCACAATATAGAACCCAGAGACCTGAGCAATTCAGGTTCAAGAGTTAACTCACCCCAGAGGAAGGTTTTGTCAGGAACAAAGTTGCAACGTGTTTTACACACTCCACTTATGACAGAGCCATCAACAACGTTAGGTTCTAACAAGTTTCCTGAGGTGTTTCGAGTAAAACAAGGAAGCCATGCTGATCATCCTTCAGCCAAAATTTCAGAACTGATGAAATCAACTAGCTTGGATAATGCTCCTACTCAGTCGCTTTTGAGTGTGGTGAATGGTATTTTGGAGGAAAGTGTTGAAAGAAGAAATGGCGAAATACCTCAACGTGTGGCTTGCTTATTGAGAAAGGTTGTGCAAGAGATTGAGCGACGTATATCAACTCAAGCAGAACATTTAAAAACTCAAAACAATATTTTTAAGGCCCGTGAAGAAAAATATCACTCAAGAATCAGAGTCCTTGAAGCTCTTGCATCTGGAACTGAGGAAGAGAAAGAGGTATATACTGAATTATTACAAATACAGTGTTCACAGTTGAAAGCAAAAGTTGAGGAGAAGAACATGACAGAGGGAACAGATTCTATCAGATATATTAAAGAATTAGAGGACAAAAATATGGAAATTTCAACACTAAAGAAAAAACTAGAGACAATGAAAAAAGAATATGAAGTACAATGCTCACAGTTGGAAGCAAAAGTTGAGGAGGAAAAGAGGGAAGAGGGCAAAGAGGTTAGTAGATATATTAAAGAACTAGAGGACAAAGAAATGGAAATTTCAGCAATGAGGCAAAGACTAGAAACAGTGACAAAAACATACGAAGTACAATGCTCACAACTGAAAGAAAAAGCTGAGGAGGAAAAGATGGCAAATGGAAACGAGGTTATTAATTATATCAAACAGTTGGAGGACAAAAACAAGGAAATTTCTGCATATAAGCAAGAATTGGAAACAATGAAAAAAACATATGAAGTTCAATGCTCACAGTTGAAAGCAAAAACTGAAGAGGAAAAAATAGCAAGTGGGAATGAGACCATTAGATATATCAAAGAGCTAGAGGAAAAAAATATGGAAATTTCAGCATTTAAACAAGAACTAGAAACAATGAAAAAAACATATGAAGATGAATGCTCACAATTGAAAGCAAACGCTGAAGAGGAAAAAATGACGAATGGGAGAGAAATTATTAAATATACCAAAGAGCTAGAGGACAAAAACATGGAAATTTTAGCATTTAAGAAAGAACTAGAAACAACGAAAGAAACATATGAAGAACAATGCTCAGAATTGAAAGCAAAAGCTCAAGATGAAAAAATGGCGAATGAGAAAGAAATTATGAAATATATGAAAGAGGTAGAGGACAAAAGTATGGAAATTTCATCATTTAAGCAAGAACTAGAAACAACGAAAAAATCACATGAAGTACAATGCTCACAATGGGAAGCAAAAGTGGAGGCTGGTAAAGAAGAGCTGAAACAGAAATCACAAGAATACGAAAACTTGATGGAAAAACTAAGAAATAAGATTAAAGAGAATGAAACCATTTACGAGTCAAAATATCAGAAGTGGGTGCAGAAAGAGAACCAAATACGAAAAGATGTGAATTTTCAGTTCAGTTCCATCAAGACATTGAAATTATCATGGGAATCTATTAAGCAAGATGCTTTGAAAGAGCAAAAGATTTACTCTGAGGAATGTAAAAAATTAGGTTTAAATCTGAAACCACTGGTAGATGCAGCAGAGAATTATCAAATAGTTCTTGCAGAAAATCGAAAACTGTTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTATATTGTCGACTAAGACCATTTCTTCCTGGTCAAAAGGAAAAACAAACTATTGTGGAACACATTGGTGAAACAGAGTTGGTTGTGGCAAATCCTTCCAAACAAGGAAAGGAAGGCCTTAGATCATTTAAGTTCAACAAGGTCTTTGGTCCAACCTCAACTCAAGCTGGGGTGTATGGTGACATACAAGCCTTCATACGATCAGTATTGGATGGCTACAACGTATGTATATTTGCTTATGGTCAGACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATAATCCAACACCAGAGAGTGTTGGTGTTAACTATCGAGCTCTTAATGATCTCTTCAGCATATCCACAAGTAGAAAAAGCTCCATAGAGTATGAGATTGGGGTTCAAGTAATTGAGATATACAATGAACAAGTGCGAGACTTATTAACAACTGATGCTACAAAGAAATACACACTTGGGATATTGAATCATGCTCAACCAAATGGATTGGCAGTGCCTGATGCTACCATGCAACCTGTGAAAACAACTGAGGATGTCATAAAGCTAATGGACATTGGTCTGAAAAATAGAGCTAAGGGTTCGACAGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGGATGGATAAAAAGTCTGGTTCCACTCTTTTTGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAGTTGATCGCTCTGAAGTGGTTGGTGATAGACTCAAGGAAGCACAACACATTAACAAATCACTTTCTGCTCTTGGAGATGTCATTTTTGCACTTTCTCAGAAGAGTGCTCATGTGCCATATAGAAATAGCAAGCTTACTCAACTTCTGCAAACATCTCTTGGTGGTCAAGCAAAAACACTCATGTTGGTCCAAATTAATTCTGATGTAAAGTCATTTTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGAATTGAGTTAGGAGCTGCTAAGAGTAGTAAAGAAGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTTTGAAGGACACTATTTTGGTTAAGGATGAGGAGATTGAGAAGTTACAATTACTTAAGGATCTAAAAAATGTGTATCCTGGTGCTAATTCTGAGAACGTTGAAACTGCCTAA 2982 0.3632 MNPPSINHNIEPRDLSNSGSRVNSPQRKVLSGTKLQRVLHTPLMTEPSTTLGSNKFPEVFRVKQGSHADHPSAKISELMKSTSLDNAPTQSLLSVVNGILEESVERRNGEIPQRVACLLRKVVQEIERRISTQAEHLKTQNNIFKAREEKYHSRIRVLEALASGTEEEKEVYTELLQIQCSQLKAKVEEKNMTEGTDSIRYIKELEDKNMEISTLKKKLETMKKEYEVQCSQLEAKVEEEKREEGKEVSRYIKELEDKEMEISAMRQRLETVTKTYEVQCSQLKEKAEEEKMANGNEVINYIKQLEDKNKEISAYKQELETMKKTYEVQCSQLKAKTEEEKIASGNETIRYIKELEEKNMEISAFKQELETMKKTYEDECSQLKANAEEEKMTNGREIIKYTKELEDKNMEILAFKKELETTKETYEEQCSELKAKAQDEKMANEKEIMKYMKEVEDKSMEISSFKQELETTKKSHEVQCSQWEAKVEAGKEELKQKSQEYENLMEKLRNKIKENETIYESKYQKWVQKENQIRKDVNFQFSSIKTLKLSWESIKQDALKEQKIYSEECKKLGLNLKPLVDAAENYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQTIVEHIGETELVVANPSKQGKEGLRSFKFNKVFGPTSTQAGVYGDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNPTPESVGVNYRALNDLFSISTSRKSSIEYEIGVQVIEIYNEQVRDLLTTDATKKYTLGILNHAQPNGLAVPDATMQPVKTTEDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGMDKKSGSTLFGNLHLVDLAGSERVDRSEVVGDRLKEAQHINKSLSALGDVIFALSQKSAHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGIELGAAKSSKEGRDVRELMEQVASLKDTILVKDEEIEKLQLLKDLKNVYPGANSENVETA 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00285 993 PANTHER KINESIN-LIKE PROTEIN KLP-3 437 971 IPR027640 GO:0003777|GO:0007018
Viun4g00285 993 PRINTS Kinesin heavy chain signature 680 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 PRINTS Kinesin heavy chain signature 835 853 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 PRINTS Kinesin heavy chain signature 804 821 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 PRINTS Kinesin heavy chain signature 884 905 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 Coils Coil 405 454 - -
Viun4g00285 993 Coils Coil 466 518 - -
Viun4g00285 993 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 548 936 - -
Viun4g00285 993 Pfam Kinesin motor domain 612 933 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 Coils Coil 352 393 - -
Viun4g00285 993 Gene3D Kinesin motor domain 601 975 IPR036961 -
Viun4g00285 993 Coils Coil 202 275 - -
Viun4g00285 993 ProSiteProfiles Kinesin motor domain profile. 606 934 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 972 IPR027417 -
Viun4g00285 993 Coils Coil 298 336 - -
Viun4g00285 993 SMART kinesin_4 604 942 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00285 993 Gene3D - 394 434 - -
Viun4g00285 993 Gene3D - 195 234 - -
Viun4g00285 993 Gene3D - 443 484 - -
Viun4g00285 993 Gene3D - 244 284 - -
Viun4g00285 993 Gene3D - 294 335 - -
Viun4g00285 993 Gene3D - 344 384 - -
Viun4g00285 993 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00285 Viun-Chr4 1666151 1672408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00285 594 952 Calmodulin-binding Proteins AT5G65930 38.904 3.23e-67 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00285 K10406 - gmx:100779403 1093.95