Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00284 ATGAGGAAAGTTGATGGTTGGGTAACGCAACATGGGACCCTCGATTTTTCCATTGTTGTACCAAACAAAACCACACTCCCCATTATTCTTGGAAACCCAAAACAGCTGCGCTCTATTCTAAACCCACTCACTCCTCTCATCACTATAAAACCATTCCTCATCTTCATTCTTCTCTTCCTCACCGTCTTCCTTCACACTGCAACAAAACATTTTTTCCTTTCTCCTTACACCTCACTATTCACCATGCGGTTGAGCTGCAACGGTTGCCGCGTGCTCCGGCGAGGGTGCACGGTGGAGTGCCCCATTCGAACCTCCCTTCAATGGATAAGTTGCCCTGACTCTCAGTCCAACGCCACCCTCTTTCTCGCCAAGTTCTATGGCCGTCAAGGCCTCCTCAACCTCCTCACCAACGCTCCCTCCCATCTTCAACCAGCGGTATTCAAATCTTTGCTTTACGAAGCTTGCGGTCGGATGGTGAATCCGATTTTCGGCTCGACCGGGTTACTCTCGACCGGAAATTGGCACCTCTGTGAAGCTGCTGCCAAAGCCGTTCTCAGCGGCGCGCCGATTCAGCAGGCTCTTCTGGATGGCGCCGAGAGCCTCCATTCAAAGGATTGCGATATTCGCCACGTGGCGAAGAGTCATAAATCGTGCGGTCCTGATGCGCTTCACAGGGTGAAGTCACGGACCAGCAAGCTCAAGCGCCGCGCTGCGAAGCCAAAAGTTGAATCATTCGTGGCTGAGTTGGCTCAAAACGAGTTAGATGGACGGGGCTCGCTGAGTCAGGACTCGGCGTCTGGGTTGACTCGGACGAGTGAGAACAAAATCATTGGTGGGGAAGCCGATAGCAGCTGCAGCGAGAATGTGGTGGAGCCGGCTCGAGCCAATGATGAAGAAATTGAGCTTCATTTGACTTTGGGGTGGGGTCCAGTGAAAAAATCAACAACTCCTGTGGTGCCACGTGTAGGGCTCGATCTTTCTGGCTAG 987 0.5248 MRKVDGWVTQHGTLDFSIVVPNKTTLPIILGNPKQLRSILNPLTPLITIKPFLIFILLFLTVFLHTATKHFFLSPYTSLFTMRLSCNGCRVLRRGCTVECPIRTSLQWISCPDSQSNATLFLAKFYGRQGLLNLLTNAPSHLQPAVFKSLLYEACGRMVNPIFGSTGLLSTGNWHLCEAAAKAVLSGAPIQQALLDGAESLHSKDCDIRHVAKSHKSCGPDALHRVKSRTSKLKRRAAKPKVESFVAELAQNELDGRGSLSQDSASGLTRTSENKIIGGEADSSCSENVVEPARANDEEIELHLTLGWGPVKKSTTPVVPRVGLDLSG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00284 328 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 84 305 - -
Viun4g00284 328 Pfam Lateral organ boundaries (LOB) domain 85 183 IPR004883 -
Viun4g00284 328 ProSiteProfiles LOB domain profile. 84 190 IPR004883 -
Viun4g00284 328 MobiDBLite consensus disorder prediction 256 281 - -
Viun4g00284 328 MobiDBLite consensus disorder prediction 256 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00284 Viun-Chr4 1659331 1660836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00284 82 324 AS2 family AT3G02550 42.969 1.30e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun4g00284 LOB 1.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00284 - - vun:114181255 635.18