Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00278 ATGGTAAAAGCGAGGGACAGAACCGAGGATTTCAAAGATGCCGTGCGCCACACCGCTCACTCTTTGGGCTACGACGAGGCTAAAGTAGCGTCAATTATGGCATCTTTCATTATCCATAAACCGCCGCAAAGGTCTCCATTTTCCAAAGCCGCATTGAAGACGCTGGAGAGTATTGGAGAGCTGGATCAGTTTTTGTCGAAGCATAGAAAGGACTATACGGATCTGCATCGCACCACAGAAAAGGAAAGAGATAGCATCGAGCATGAAGTTAGTACTTTTATTAAAACATGCCAGGAACAAATTGATATTCTTAAGAATAGTATAAATCAAGAAGAGGAAACTTCCAAAGGTTGGCTTGGCATTGCGACTACAAAATCTAATGCCGACATGATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGTGAGAGACTCCATACAGTCACTGCACAGTTTGATCAGCTAAGAGCTGTACGCTTCCAGGATGCTATTAATAAAGCAATACCACGGAGAAAACTTAACCGTGTAACCAGAAAAGATTCTGCAGAAACCTCAAAACCAGATACCATGGAGCTCAGAGAACCTGAAGAGTTACGTGCTGAGCCTTTAAGAGTCCAGCAACAACTCTTGGACGATGAAACACGTGCCCTGCAGGTGGAATTGACTAATCTTCTCGATACAGTTCAAGAAACCGAAACTAAGATGGTGGAAATGTCTGCACTAAATCACCTCATGTCTACTCATGTTTTGCAACAATCTCAGCAAATTGAGCATCTTTATGAGCAGGCTGTTGAAGCGACTAAGAATGTTGAGCTCGGTAACAAAGAACTCTCACAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTACTGTTTCTATTTGTGCTTACTTTTTCAATCCTCTTTCTTGATTGGTATAGTTAA 930 0.4237 MVKARDRTEDFKDAVRHTAHSLGYDEAKVASIMASFIIHKPPQRSPFSKAALKTLESIGELDQFLSKHRKDYTDLHRTTEKERDSIEHEVSTFIKTCQEQIDILKNSINQEEETSKGWLGIATTKSNADMIAHKHGVVLILSERLHTVTAQFDQLRAVRFQDAINKAIPRRKLNRVTRKDSAETSKPDTMELREPEELRAEPLRVQQQLLDDETRALQVELTNLLDTVQETETKMVEMSALNHLMSTHVLQQSQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00278 309 SUPERFAMILY t-snare proteins 55 273 IPR010989 GO:0016020|GO:0016192
Viun4g00278 309 Coils Coil 94 114 - -
Viun4g00278 309 PANTHER SYNTAXIN-18 1 309 - -
Viun4g00278 309 FunFam Syntaxin-81 like 212 306 - -
Viun4g00278 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Viun4g00278 309 Gene3D - 212 306 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00278 67 309 SNARE and Associated Proteins AT1G51740 72.951 9.84e-111 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00278 K08492 - gmx:100801587 548.125