Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00260 ATGTTACTTGAAACATTGACCATCCCTGCAACACTCCTTGTACTATTCATTTTGATTCTATCCTTTGCCTTGTTCCATCCAAACCAACACCTTAAAGATGACAGAAAACATCCACCAGGTCCCAAACCCTTGCCGATTATTGGTAACCTTCACATGCTAGGAAAACTCCCACATCGAACGCTTCAAGCCCTTGCCAAAAAACATGGTCCCATAATGTCCATAAAGTTAGGACAGATCCCAGCCATTGTCGTTTCCTCCCCTGAAACTGCAGAACTTTTCCTCAAGACCCATGATGTTGTGTTTGCTAGCAGGCCCAAAATTCAAGCTGCAGAATACCTATCTTATGGCGGCAAGGGCATGGTGTTTACGGAGTATGGACCCTATTGGCGGCACGTGAGAAAGTTGTGCACCACGCAGCTTCTAAGTTCATCAAAGGTTGAGATGCTTGGTCCTTTGAGGAGGGAGGAGTTAGGAGTGTTTGTGAAATCGGTTGAAAAGGTAGCAGCTTCAGGTGATGTTGTGAATTTGAGTGAGCAGATTGGGGAGCTTATGTCAAATATTGTCTGTAAAATGATACTTGGGTGTAGTAAAGATGATAGATTCGACCTAAAAGGGCTTACTCGTCAGGTTCTGCACTTGGTTGGAGTGTTCAACGTAGCAGATTATGTACCTTGGGCAGCCATCTTTGATCTCCAGGGGTTGAAAACAAAACTCAAGAAAGCTAGGAATGCATTTGACCAAGTGTTTGAGCAAATAATCAAAGATCATGAATATCCAACTGATAGAGACAAGAAAAGTGTGCAATATTCTGAGGATTTTGTGGACATGCTTCTATCACACATGCACCAAGCCATGGATCAGCAGGAACAGGATCACTTCATTGACAGAACTAACGTGAAGGCTATCATAATTGATATGATAGCAGGAGCATTTGAAACATCAGGTGTGGCACTCGAGTGGGCCATGTCGGAACTCTTAAGGCACCCAAAGGATATGAAGAAACTCCAACAAGAGTTAACCGATGTAGTTGGAATGAACAGGTTTGTGGAAGAGTGTGATTTACCAAAGCTTCATTTTCTGGACATGGTGGTGAAAGAGACTCTGAGGCTATATCCTCCGGGACCCTTGCTAGTGCCTCGTGAGTCCTCACAAGACATTTGTATTGACGGCTATCACATAAAGAAGAAGACAAGAATTTTGATCAATGCATGGGCCATAGGACGAGATCCTAAGGTGTGGTCGGAAAATGCTGAAATGTTTTATCCTGAGAGATTTTCTGACAGTGACATAGACATCAGAGGACATGACTTTCGGCTTTTACCGTTTGGTTCTGGTCGCAGAGGATGTCCTGGGATTCAATTGGGTCTAACCACGTTTGGGTTTGCTTTGGCTCAGTTGGTGCATTGCTTCGATTGGAAGCTTCCAATTGGAATGTCTTGTGATGACTTAGATATGACTGAAGCATTTGGCCTTTCAATACCAAGAAGTAAGCATTTACTAGCTATACCAACTTATCGCCTTTCTAATGAAGCTTAA 1536 0.4329 MLLETLTIPATLLVLFILILSFALFHPNQHLKDDRKHPPGPKPLPIIGNLHMLGKLPHRTLQALAKKHGPIMSIKLGQIPAIVVSSPETAELFLKTHDVVFASRPKIQAAEYLSYGGKGMVFTEYGPYWRHVRKLCTTQLLSSSKVEMLGPLRREELGVFVKSVEKVAASGDVVNLSEQIGELMSNIVCKMILGCSKDDRFDLKGLTRQVLHLVGVFNVADYVPWAAIFDLQGLKTKLKKARNAFDQVFEQIIKDHEYPTDRDKKSVQYSEDFVDMLLSHMHQAMDQQEQDHFIDRTNVKAIIIDMIAGAFETSGVALEWAMSELLRHPKDMKKLQQELTDVVGMNRFVEECDLPKLHFLDMVVKETLRLYPPGPLLVPRESSQDICIDGYHIKKKTRILINAWAIGRDPKVWSENAEMFYPERFSDSDIDIRGHDFRLLPFGSGRRGCPGIQLGLTTFGFALAQLVHCFDWKLPIGMSCDDLDMTEAFGLSIPRSKHLLAIPTYRLSNEA 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00260 511 PANTHER CYTOCHROME P450 93A3-LIKE 13 508 - -
Viun4g00260 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Viun4g00260 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 FunFam Cytochrome P450 83B1 25 502 - -
Viun4g00260 511 Pfam Cytochrome P450 38 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 CDD CYP71-like 67 499 - -
Viun4g00260 511 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 SUPERFAMILY Cytochrome P450 35 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00260 511 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00260 Viun-Chr4 1529400 1531373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00260 12 504 Cytochrome P450 AT3G26300 38.690 6.69e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00260 - - gmx:100782181 794.653