Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00259 ATGACACTGTTTTTGCCAGCAGACCCAAAACCCAAAGTCTCCGAAATTCTTTCTTATGGCAGCAAAGGTTTGGCCTTTTCTGAGTACAGTGCATACTGGCGCAACGCCAGGAAAGTGTGCACTGTGCAGCTTCTGAGTGCCTCAAAGGTTGAGATGTTTGCTCCTCTGAGGAGAGAGGAGTTGAGAATGTTGGTGAAGTCACTGAAAAATTGTGCAGAATCAGGTGAAGTTGTGGATCTGAGTAATTTGCTGGGGGAACTGATGGAGAACATAGTGTTCAAAATAGTGTTGGAACGTGCCAAAGATGATAGATTTGACTTCAAATTGCTGACTCACGAGGTGATGAACTTGGCTGGAGCTTTCAATCTTGCAGATTACATGCCCTGGGTAGGGTTGTTTGATCCTCAGGGAATAACAAGAAGATTAAAGAAAGCAGCAAAGTCATTTGACGAATTGGTGGAGCAAATAATTCAAGAACACGAAAGTAATCCATATAATGAAGATAAAAATTATAATATGGACTTTGTGGACATTTTGTTGTCACTCATGCACCAATATGATGACTTTATTAATAGAACAAATGTGAAAACTATCATATTATACATGATCACTGCAACATTTGACACCTCTTCCACAACAATAGAATGGGCTATGTCACAACTTTTGAGACACCCATGTGAGATGAAGAGACTTCAACAAGAGCTACAACGTGTGGTTGGAATGAACAGACACGTGGAAGAAAATGACTTGGAAAAGTTATCTTATTTGAACATGGTGGTGAAGGAAACACTAAGGTTACACCTAGTTGGACCTTTGCTAGCACCTCACGAGTGTAGAGAAGATGTTACTGTTGATGGTTATTTCATAAAGAAAAAAACAAGGGTTATAACAAATGTTTGGGCTATAGGACGAGATCCTAAAGTTTGGGAAAAGGCCGAGAATTTTTATCCTACAAGGTTTGAGAATAGCAACATAGACGTTCGTGGAATGGATTTTCGAATTTTACCATTTGAGTCAGGTCGAAGAGGGTGTCCCGGGATTCATTTGGGTTTAACCATGGTTAGTCTTGTTTTGGCTGAATTGGTTCACTGTTTTGATTGGGTGCTTCCATTGGACATGTCTTGTGATGAGTTAGACATGGAAGAGATATTTGGACTCACCACTCCAAGAAAGAAGCATTTGTTAATTAAACCAGTTTATCGACTAGTTATTTAG 1215 0.3975 MTLFLPADPKPKVSEILSYGSKGLAFSEYSAYWRNARKVCTVQLLSASKVEMFAPLRREELRMLVKSLKNCAESGEVVDLSNLLGELMENIVFKIVLERAKDDRFDFKLLTHEVMNLAGAFNLADYMPWVGLFDPQGITRRLKKAAKSFDELVEQIIQEHESNPYNEDKNYNMDFVDILLSLMHQYDDFINRTNVKTIILYMITATFDTSSTTIEWAMSQLLRHPCEMKRLQQELQRVVGMNRHVEENDLEKLSYLNMVVKETLRLHLVGPLLAPHECREDVTVDGYFIKKKTRVITNVWAIGRDPKVWEKAENFYPTRFENSNIDVRGMDFRILPFESGRRGCPGIHLGLTMVSLVLAELVHCFDWVLPLDMSCDELDMEEIFGLTTPRKKHLLIKPVYRLVI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00259 404 CDD CYP71-like 9 394 - -
Viun4g00259 404 Pfam Cytochrome P450 18 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS E-class P450 group I signature 334 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS E-class P450 group I signature 298 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS E-class P450 group I signature 257 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS E-class P450 group I signature 344 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS E-class P450 group I signature 214 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS E-class P450 group I signature 194 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 Gene3D Cytochrome P450 3 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 SUPERFAMILY Cytochrome P450 11 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 FunFam Uncharacterized protein 67 397 - -
Viun4g00259 404 PANTHER CYTOCHROME P450 93A3-LIKE 8 402 - -
Viun4g00259 404 PRINTS P450 superfamily signature 205 222 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS P450 superfamily signature 335 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 PRINTS P450 superfamily signature 258 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00259 404 Coils Coil 228 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00259 Viun-Chr4 1521732 1523676 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00259 17 403 Monolignol Biosynthesis Gene Families AT4G36220 38.916 1.47e-97 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00259 - - vum:124839090 658.677