Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00257 ATGCACCAACCTAATGATATCCAGAACCACCATGACATCATTGATAGAACAAACGTGAAAGCGGTTATATTAGACATTATTATTGCATCTTCTGAAGCCTCTTCCAAAACAATAGATTGGGCCATGTCACTACTCTTGAGGCATCCATCTGTCATGAAGAGACTTCAAGAGGAGCTGAAACATGTGATCGGAATGAACAAACACGTGGGGGAAAATGACTTGAAAAAGTTGTCTTATTTGAACATGGTGGTGAAGGAAACATTAAGGCTTCACCCGATTGGACCTTTACTAATACCACGCGAGTGTAGAGAAGATGTTATTATTGACGGTTACTTCATAAAGAAAAAAACAAGAGTTATAATAAATGCATGGGCAATAGGACGAGATCCTAAAGTTTGGGACAAGGCCGAGATTTTTGATCCTGCAAGGTTTGAGAATGACAACGTAGACCTTCATGGAAATGACTTTCGGATTTTACCATTTGGGTCAGGTCGAAGAGGGTGCCCTGGGATGCATTTAGGTTTAACTACGATTAGTCTTGTTTTGGCTGAACTGGTGCATTGTTTTGATTGGATGCTTCCATTAGGCATGCATTGTGATGAGTTAGATATGGAAGAGATATTTGGACTCAGCACACCAAGAAAAAAACATCTCTTAACTAGGCCAATTTACCAGCTAGCTACTTAG 687 0.4003 MHQPNDIQNHHDIIDRTNVKAVILDIIIASSEASSKTIDWAMSLLLRHPSVMKRLQEELKHVIGMNKHVGENDLKKLSYLNMVVKETLRLHPIGPLLIPRECREDVIIDGYFIKKKTRVIINAWAIGRDPKVWDKAEIFDPARFENDNVDLHGNDFRILPFGSGRRGCPGMHLGLTTISLVLAELVHCFDWMLPLGMHCDELDMEEIFGLSTPRKKHLLTRPIYQLAT 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00257 228 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS E-class P450 group I signature 168 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS E-class P450 group I signature 158 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 161 170 IPR017972 GO:0005506|GO:0016705
Viun4g00257 228 Pfam Cytochrome P450 13 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS P450 superfamily signature 159 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 PANTHER CYTOCHROME P450 93A3-LIKE 13 226 - -
Viun4g00257 228 SUPERFAMILY Cytochrome P450 11 218 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00257 228 FunFam Predicted protein 27 220 - -
Viun4g00257 228 Gene3D Cytochrome P450 2 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00257 Viun-Chr4 1498510 1499370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00257 1 226 Monolignol Biosynthesis Gene Families AT4G36220 46.696 2.45e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00257 - - var:108345921 393.275