Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00252 ATGTTGCTTCAAGCACTAGCTATCCTCTCCATCACACTCTCATTCATTGTTTTTGTGTTCTTCCGAAAAAAACATCATGGGAGAACTGCACCAGGTCCTAAACCCTTGCCAATTATAGGTAACCTTCACATGCTAGGAAAACTCCCACATCGAAGCCTTCAATCCCTTGCCACAAAATATGGTCCCATAATGTCCTTAAAGCTGGGGCAGGTCCCAGCCATAGTGGTTTCTTCCCCCGAAACTGCAGAGCTGTTCCTGAAAACCCATGACATTGTTTTTGCCAGCAGACCCAAAACCCAAGCCACCGAATTTCTTTCTTATGGCAGCAAAGGTTTGGCCTTTTCTGAGTACAGTGCATACTGGCGCAACATGAGGAAAGTGTGCACTCTGCAGCTTCTGAGTGCCTCAAAGGTTGAAATGTTTGCTCCTCTGAGGAGAGAAGAGTTGGGAATGCTGGTGAAGTCGCTGAAAAATTGTGCAGAATCAGGTGAAGTCGTGGATCTGAGTCATTTGCTGGGGGAGCTGATGGAGAACATCGTCTTCAAAATGGTGTTGGGACGTGCCAAAGATGACAGATTTGACATGAAATTGCTGACTCACGAGGTGATGAACTTGCTTGGAGCTTTCAATCTTGCAGATTACATGCCCTGGGTAGGGGTGTTTGATCCTCAGGGAAGAACAAAAAGATTAAAGAAAGCAGCAAAGTCATTTGATGAGTTTCTGGAGCAAATAATTCAAGAACATGAAAGTAATCCATACGATGAAGATAAAAATCACAACATGGACTTTGTGGATATTTTGTTGTCACTCATGCACCAACCCAATGATCTTCAAAACCACCAATATGTCATTGATAGAACAAATGTGAAAGCTATATTATTTGACATGATCACTGCAACATTTGACACCTCTTCCACAACAGTAGAATGGGCTATGTCACAACTCTTAAGACAACCATGTGAGATGAAGAAACTTCAACAAGAGCTACAACATGTGGTTGGAATGAATAGACACGTGGAGGAAAAGGACTTGGAAAAGTTGTCTTATTTGAACATGGTGGTGAAGGAAACACTAAGGTTACACCCGGTTGGACCTTTGCTAGTACCTCATGAGTGCAGAGAAGATGTTACTATTGATGGTTATTTCATAAGGAAAAGATCAAGGGTTATAATAAATGCTTGGGCTATAGGGCGAGATCCTAAAGTTTGGGAAATGGCCGAAATTTTCAATCCTACAAGGTTTGAGAATAACAACATAGACATTCGTGGAAAGGACTTTCGAATTATACCATTTGGGTCAGGTCGAAGAGGGTGCCCTGGGATTCATTTGGGTTTAACCATGGTTAGTCTTATTTTGGCTGAATTGGTGCATTGTTTTGACTGGGTGCTTCCGTTGGGCATGTCTTGTGATGAGTTAGACATGGAAGAGATATTTGGACTCACCGTACCAAGAAAGAAGCATTTGTTAATTAGACCAATTTATCGATTAGCTGTTTAG 1497 0.4208 MLLQALAILSITLSFIVFVFFRKKHHGRTAPGPKPLPIIGNLHMLGKLPHRSLQSLATKYGPIMSLKLGQVPAIVVSSPETAELFLKTHDIVFASRPKTQATEFLSYGSKGLAFSEYSAYWRNMRKVCTLQLLSASKVEMFAPLRREELGMLVKSLKNCAESGEVVDLSHLLGELMENIVFKMVLGRAKDDRFDMKLLTHEVMNLLGAFNLADYMPWVGVFDPQGRTKRLKKAAKSFDEFLEQIIQEHESNPYDEDKNHNMDFVDILLSLMHQPNDLQNHQYVIDRTNVKAILFDMITATFDTSSTTVEWAMSQLLRQPCEMKKLQQELQHVVGMNRHVEEKDLEKLSYLNMVVKETLRLHPVGPLLVPHECREDVTIDGYFIRKRSRVIINAWAIGRDPKVWEMAEIFNPTRFENNNIDIRGKDFRIIPFGSGRRGCPGIHLGLTMVSLILAELVHCFDWVLPLGMSCDELDMEEIFGLTVPRKKHLLIRPIYRLAV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00252 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Viun4g00252 498 PANTHER CYTOCHROME P450 93A3-LIKE 6 496 - -
Viun4g00252 498 SUPERFAMILY Cytochrome P450 22 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 FunFam Cytochrome P450 83B1 17 491 - -
Viun4g00252 498 Coils Coil 322 342 - -
Viun4g00252 498 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 Pfam Cytochrome P450 31 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 Gene3D Cytochrome P450 21 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 CDD CYP71-like 59 488 - -
Viun4g00252 498 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00252 498 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00252 Viun-Chr4 1453981 1457593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00252 37 496 Monolignol Biosynthesis Gene Families AT4G36220 41.561 2.01e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00252 - - var:108345921 846.654