Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00251 ATGTTGTTTCAAGCACTAGCTATCATCTTCATCACACTCTCATTCATTGTTTTTGTGTTTCAAAACAAACATCATGGAAGAGCTGCACCAGGTCCCAAACCCTTGCCAATTATTGGTAACCTTCACATGCTGGGAAAACTCCCACATCGGAGCCTTCAATCTCTTGCCACAAAATATGGTCCCATAATGTCCTTAAAGCTAGGGCAGGTCCCAGCCATAGTTGTTTCTTCCCCACAAACTGCAGAACTGTTCCTGAAAACCCATGACACTGTTTTTGCCAGCAGACCCAAAATCCAAGCCTCAGACTTTCTTTGTCATGGCAGCAAGGGTTTGGCTTTTTCTGAGTACAGTGCATACTGGCGCAACGCCAGGAAAGTGTGCACTCTGCAGCTTCTGAGTGCCTCAAAGGTCGAAATGTTTGGTCCTCTGAGGAGAGAGGAGTTGGGAGTGTTGGTGAAGTCGCTCAAAAATTCTGCAGAATCAGGTGAAGTTGTGGATCTGAGTCAGTTGCTGGGGGAGCTTATGGAGAACATCGTGTTCAAAATGGTGTTGGGACGTGACAAAGATGATAGATTTGACTTAAAATGGCTGATTTACGAGGTGATGAACTTGGTTGGAGCTTTCAATCTTGCAGATTACATGCCCTGGCTTGGGGTGTTTGATCCTCAGGGATTAACCAGAAGATTAAAGAAATTAACCAAGTTATTCGACGAGTTTTTGGAGAAGATAATCCAAGAACACGAGAGTAATCCATATGACAAAGACAAAAACCGCAACATGGACTTTGTGGACATTTTGCTGTCACTCATGTACCAACCCAGTGATCTTCAAAATCACCAAAATGCCATTGATAGAACAAACGTGAAAGGTATCATATTAGATATGATCACTGCAGCATTTGACACCTCTTCCACTACAGTAGAGTGGGCCATGTCACAACTCTTGAGACATCCAGCTGTCATGAAGAGACTTCAGCAAGAGCTTACACATGTGGTCGGAATGAAAAGACAAGTGGAGGAAAATGACTTGGAAAAGTTATCCTATTTGAACATGGTGGTGAAGGAAACGCTAAGGTTACACCCAGTTGCACCTTTGTTATTACCTCGCGAATGTAGAGAAGATGTCACTGTTGATGGTTATTTCATAAAGAAAAAATCAAGGGTTATAATAAATGCTTGGGCTATAGGGCGAGATCCTAAAGTTTGGGACAAGTCAGAGATTTTCGATCCTACAAGGTTTGAAAATAATAACATAGACGTTCGTGGAAAGGACTTTCGGATTTTACCATTTGGGTCGGGTCGAAGAGGGTGCCCTGGGATTCATTTGGGTTTGACCACTATTAGTCTTGTTTTGGCTGAATTGGTGCATTGTTTTGATTGGGAGCTTCCATTGGGCGTGTCTTGTGATGAGTTGGACATGGAAGAGATATTTGGACTCACCACACCAAGAAAGAAACATTTACTCACTAGACCAGTTTATCGACTAGCCCTTTAA 1494 0.4284 MLFQALAIIFITLSFIVFVFQNKHHGRAAPGPKPLPIIGNLHMLGKLPHRSLQSLATKYGPIMSLKLGQVPAIVVSSPQTAELFLKTHDTVFASRPKIQASDFLCHGSKGLAFSEYSAYWRNARKVCTLQLLSASKVEMFGPLRREELGVLVKSLKNSAESGEVVDLSQLLGELMENIVFKMVLGRDKDDRFDLKWLIYEVMNLVGAFNLADYMPWLGVFDPQGLTRRLKKLTKLFDEFLEKIIQEHESNPYDKDKNRNMDFVDILLSLMYQPSDLQNHQNAIDRTNVKGIILDMITAAFDTSSTTVEWAMSQLLRHPAVMKRLQQELTHVVGMKRQVEENDLEKLSYLNMVVKETLRLHPVAPLLLPRECREDVTVDGYFIKKKSRVIINAWAIGRDPKVWDKSEIFDPTRFENNNIDVRGKDFRILPFGSGRRGCPGIHLGLTTISLVLAELVHCFDWELPLGVSCDELDMEEIFGLTTPRKKHLLTRPVYRLAL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00251 497 PANTHER CYTOCHROME P450 93A3-LIKE 5 495 - -
Viun4g00251 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Viun4g00251 497 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 SUPERFAMILY Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 Gene3D Cytochrome P450 18 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun4g00251 497 Coils Coil 321 341 - -
Viun4g00251 497 FunFam Cytochrome P450 83B1 16 490 - -
Viun4g00251 497 CDD CYP71-like 58 487 - -
Viun4g00251 497 Pfam Cytochrome P450 30 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00251 Viun-Chr4 1448359 1450650 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00251 6 496 Cytochrome P450 AT5G07990 40.711 7.56e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00251 - - var:108345921 904.434