Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00225 ATGGGTACTACTGGGAACAAGGACGATTACAATCACAACCATGATGATAATGATGCTGAGGAGTATCATCATGGGGTGAATTTCTCGATCCAGAGAGGATTCAAGGAGAAACTGAAGGCGAGTTTGAAGGAAGCTTTGTTTCCTGATGATCCCTTCAGGCAGTTCAAGAACGAGGAGAAACCGATGAGGAGGGTGCTGAAAGGGGTGCAATACTTCATCCCTATCTTTGAGTGGCTTCCAACGTATACTTGGCGTCTCTTTTGCTCTGACCTCATCGCAGGTTTAACCATTTCAAGCCTTGCAATCCCTCAAGGCATTAGCTATGGCAAACTTGCAGACCTTCCTCCTCTCATTGGCCTCTATTCAAGTTTTGTGCCACCTCTGGTGTATGCTGTTTTTGGGAGTTCAAGGCACATGGCAGTGGGGACGATAGCAGCAGCATCATTGCTTATTGGTCAAACCATACAAACTGTGGTAGATCCAAACGAGGACCCAACCTTGTATCTTCATTTGATTTTCACAACCACCTTTGTCACTGGTGTTTTCCAAGCTGCTTTGGGAGTTTTCAGGCTTGGGATATTGGTGGACTTTTTCTCTCATTCCACCATCAATGGCTTCATGGCAGGAACAGCAGTGATTCTCATCCTCCAACAGCTAAAGGGCGTGTTTGGGATGATACATTTTTCGCAGAAAACCAACTTGATCGAAGTGGTAAAGGCCATCATCAACAACAGACACGAGATTAGGTGGGAACCTACAGTTCTTGGCGTGGTCTTGTTTGCTTTCTTGCAATTTACCAAACACTTGAGGAACAAGAAGCCAAAACTCTTTTGGGTACAAGCTATAGGTCCAATGGTGACTATAGTAGTTTCTGGCGTTTTCACCTACCTTGTCAAGGGCCAAAAACATGGAATTCAAATTGTGGGGCATCTAGATAAAGGATTAAATCCATTGTCCATCCACTATTTGAACTTTAATAGCAAATACTTATCAGCAGTTTTGCAAGCTGGTATTATCACAGGAGTGTTATCATTAGCAGAAGGAATAGCAATAGGAAGAAGCTTTGCTGTTCTGGATAACTCACCTCATGATGGGAACAAAGAAATGATCGCTTTTGGTCTCATGAACTTGTTCGGATCTTTTACTTCATGCTACTTGACCAGTGGACCATTTTCGAAGACTGCAGTGAATTACAATGCAGGGTGTAAGACTGCAATGGCAAATGTGGTACAAGCAGTAGTAATGGCACTGGCACTGATATTTATTGCGCCATTATTTGGCTACACCCCTCTTGTTGCTCTCTCGGTCATTATTATATCTGCCATGCTTGGACTCATTCATTACGAAGAAGTCTTTCATCTCTTCAAAGTTGACAAATTTGATTTTGTCATTTGCATGGCTGCTTTCCTCGGAGTTGTCTTCATAAGCATGGATGTTGGTCTCATGATTTCTGTTGCATTGGGGCTTCTGAGAGCACTTCTATATGTGGCTAGACCAGCGGCATGCAAGCTTGGAAAGTTAGCTGAAGTAGGTTTATTCAGAGACACAGATCAATATAAAGTTTCAACATTCCCTGGTGTTCTTGTTATTCAACTTGGTTCTCCCGTTTACTTTGCAAATTCTAATTACGTCAAAGAAAGGATTATGAGGTATATCCGAAGTGAGCAATCCTCTACTGGAGAGAATGTTGAACACATCGTACTTGATTTGTCAGGAGTAACAGCCATTGACACAACTGCTATCAAAGCATTGGATGAGCTTGTTAAAGTGTTGACAAAGAATGCAATTAAGACATTGTTCGTAAATCCGAGGATTGAGGTGTTGGAGAAGCTTCTGGCATCAAAGTTTGTTGACAAAATTGGGAAGGAAGCATTCTATCTAACATTGGATGAGGCAGTGATGGCAAGTCAATATTCACTTCGTTCATCAAAGGAAAATAATGGCGACGGTGTCATGGTTTAA 1962 0.4225 MGTTGNKDDYNHNHDDNDAEEYHHGVNFSIQRGFKEKLKASLKEALFPDDPFRQFKNEEKPMRRVLKGVQYFIPIFEWLPTYTWRLFCSDLIAGLTISSLAIPQGISYGKLADLPPLIGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGQTIQTVVDPNEDPTLYLHLIFTTTFVTGVFQAALGVFRLGILVDFFSHSTINGFMAGTAVILILQQLKGVFGMIHFSQKTNLIEVVKAIINNRHEIRWEPTVLGVVLFAFLQFTKHLRNKKPKLFWVQAIGPMVTIVVSGVFTYLVKGQKHGIQIVGHLDKGLNPLSIHYLNFNSKYLSAVLQAGIITGVLSLAEGIAIGRSFAVLDNSPHDGNKEMIAFGLMNLFGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVVQAVVMALALIFIAPLFGYTPLVALSVIIISAMLGLIHYEEVFHLFKVDKFDFVICMAAFLGVVFISMDVGLMISVALGLLRALLYVARPAACKLGKLAEVGLFRDTDQYKVSTFPGVLVIQLGSPVYFANSNYVKERIMRYIRSEQSSTGENVEHIVLDLSGVTAIDTTAIKALDELVKVLTKNAIKTLFVNPRIEVLEKLLASKFVDKIGKEAFYLTLDEAVMASQYSLRSSKENNGDGVMV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00225 653 Pfam STAS domain 521 632 IPR002645 -
Viun4g00225 653 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Viun4g00225 653 NCBIfam sulfate permease 74 632 IPR001902 GO:0016020|GO:0055085
Viun4g00225 653 SUPERFAMILY SpoIIaa-like 519 633 IPR036513 -
Viun4g00225 653 Gene3D STAS domain 498 638 IPR036513 -
Viun4g00225 653 CDD STAS_SulP_like_sulfate_transporter 523 629 - -
Viun4g00225 653 PANTHER SULFATE TRANSPORTER 35 639 IPR001902 GO:0016020|GO:0055085
Viun4g00225 653 Pfam Sulfate permease family 87 468 IPR011547 GO:0016020
Viun4g00225 653 ProSiteProfiles STAS domain profile. 517 636 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00225 Viun-Chr4 1271753 1276525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00225 24 644 Inorganic Solute Cotransporters AT5G19600 59.807 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00225 K17471 - gmx:100789107 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00225 4 1271753 1276525 Viun4g00225 4 1271753 1276525 ECH