Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00212 ATGTCTTCTGCTACATACCCAACAAAACTTGCTTACAACTTCAAGTGGACAAACATGGCTACTCCCACAGTAAAGTTTACCAAGCTTTTCATCAATGGAGAATTTGTAGATTCTGTTTCAGGGAAAACGTTTGAGACTGTTGATCCAAGAACAGAGGAAGTGATTGCTGAAATAGCAGAAGCTACCAAAGAAGATGTTGATATTGCAGTGAAGGCTGCACGTGAAGCATTTGATTGTGGTCCATGGCCACGCATGCCCGGTGCTGAAAGAGCAAAGATTATGCTGAAATGGGCACAACTAATTGAACAGAACGTGGAAGAAATAGCAGCATTGGACACCATTGATGGAGGAAAGTTATTCAGTTGGTGTAAAGCTGTGGATGTTCCTGAAGCCTGCAACATCCTGCGTTACTATGCTGGCGCTGCTGATAAAATTCATGGAAATGTGTTCAAAACATCTCGTGACCTCCACTTGTATTCTCTTATGGAACCTGTCGGTGTTGTTGGTCACATCATCCCTTGGAATTTCCCTACGGTCATGTTCTTCGCCAAGGTTGCCCCGGCCTTGGCTGCTGGTTGCACCATGGTCATCAAGCCTGCTGAACAAACACCTCTCTCAGCACTCTTCTATGCTCATCTTGCTAAGTTGGGTGGTATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCAGGGGCTGCAATAAGCTCACACATGGACATTGATGCGGTCAGTTTTACAGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCAGCCTTGAGCAATTTGAAACCTGTTTCTCTTGAACTAGGAGGAAAGTCACCAGTGTTGATTTTTGATGATGCTGATATAGACAAAGCTGTTGATCTTGCTCTCTTTGGCATCCTCCACAACAAGGGAGAAATCTGTGTTGCATTCTCCAGAGTTTTTGTCCAGGAAGGGATATATGATGAATTTGAGAAAAGGGTTGTGGAGAAGGCTAAAACCTGGGTAGTAGGAGACCCTTTTGATCCAAAAGTTCAACAGGGACCCCAAACTAGTAAGACACAATTTGATAAAATTCTTTCCTATATTGATCATGGAAAGAGTGAAGGAGCCACACTTTTGACTGGGGGTAAGCCAGTGGGGAACAAGGGATACTACATTGAGCCAACCATTTTCATCAATGTTAAGGAGGAGATGCTGATCGAACAAGAGGAAATATTTGGACCTGTGATGACACTTTCTAAGTTCAAGACCATTGATGATGCAATTAAGAAAGCCAACAGCTCCAAATATGGCTTAGCAGCAGGGATTGTGACCAAGAACTTGGACATTGCAAACACTGTGTCAAGGTCAATCCGTGCAGGAATAATTTGGATCAACTGCTTCTTTGCATTTGATATTGATTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGCTTGGAAGCACTTCATAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTGCATGGCTTTGA 1524 0.4304 MSSATYPTKLAYNFKWTNMATPTVKFTKLFINGEFVDSVSGKTFETVDPRTEEVIAEIAEATKEDVDIAVKAAREAFDCGPWPRMPGAERAKIMLKWAQLIEQNVEEIAALDTIDGGKLFSWCKAVDVPEACNILRYYAGAADKIHGNVFKTSRDLHLYSLMEPVGVVGHIIPWNFPTVMFFAKVAPALAAGCTMVIKPAEQTPLSALFYAHLAKLGGIPDGVLNVVPGFGSTAGAAISSHMDIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPVLIFDDADIDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKRVVEKAKTWVVGDPFDPKVQQGPQTSKTQFDKILSYIDHGKSEGATLLTGGKPVGNKGYYIEPTIFINVKEEMLIEQEEIFGPVMTLSKFKTIDDAIKKANSSKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKYLQVKSVATPIYNSAWL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00212 507 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 301 312 IPR016160 GO:0016491
Viun4g00212 507 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 273 280 IPR029510 GO:0016491
Viun4g00212 507 FunFam Aldehyde dehydrogenase, putative 469 495 - -
Viun4g00212 507 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 31 295 - -
Viun4g00212 507 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 498 - -
Viun4g00212 507 SUPERFAMILY ALDH-like 15 503 IPR016161 GO:0016491
Viun4g00212 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 31 495 IPR016162 GO:0016491
Viun4g00212 507 Pfam Aldehyde dehydrogenase family 35 497 IPR015590 GO:0016491
Viun4g00212 507 FunFam Aldehyde dehydrogenase3 277 466 - -
Viun4g00212 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 277 466 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00212 Viun-Chr4 1198841 1201846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00212 17 507 Aldehyde Dehydrogenase Gene Family AT3G24503 68.902 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00212 K12355 - gmx:100784449 929.087