Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00205 ATGAGTGTGATTGGGAGAGCGATGCCGCGATCCAATTCCGCCGCGCACCACCACCGTCAGAGCTCCGACAACTTCATCCTCGACGCTCACAGAAACTGGTTACAGTCTTCGACTTTCGCGCAGGAGTTCGGGACTCGATCTTCGAGCTTGAGGAAAATTGACGATGATCGTGTTTTGAGCAGTGGCTTGCTTGATCTGCATTCCTTAGATACCGAGCTTTTACCTGAGACGTATGGTGATCACAATGAATACTTGACTAATCACACTGTTCGGGGACAGAGTTTTGATGACTATGAGTCAATCCTCCCTGGTAACAAACATGGACAGAGGTCTCGGGGATTGCCTGAGAACAATTTCCTGAAAAGTGTCCCAACAGAAAAAGAAAGAGCAAACAATGTTGCCAAGATTAAAGTAGCGGTCCGGAAGAGACCCCTTAATAAGAAGGAAATAGCAAAGAGGGAGGAAGACATTATTTCTATAGATTCAAATTTTCTCACAGTGCATGAAAGAAAACTCAAGGTGGACTTAACAGAATATGTTGAGAAACATGAATTTGTCTTTGATGCTGTGCTGAACGAAGATGTTTCAAATGATGAAGTATATGCCGAGACTGTGGAGCCAATTGTTCCGCTCATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGCAGTGGGAAGACATATACTATGCAACCTTTGCCTCTCAAAGCTTCACAAGATATTTTAAGATTAATGCACAACACCTACTGGAATCAAGGTTTCCAATTGTTTGTTAGTTTCTTCGAAATATATGGGGGAAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTTCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAATATAGAGTATCTAAAGTAGAGACAATCAACGAATTTATTGAGAAAGGAAATGCCTCAAGAAGTACTGGCACAACTGGAGCAAATGAGGAATCCTCTAGATCACATGCTATACTTCAGCTTTGCATTAAGAGATCAGTTGACGGGACTGAATCAAAGCCTGCTCGACTTGTGGGAAAACTTTCTTTTATAGATCTGGCTGGAAGTGAACGAGGTGCAGATACTACAGATAATGACAAGCAGACTAGGATTGAAGGGGCAGAAATAAATAAAAGTTTACTTGCTCTGAAGGAATGCATTAGAGCTTTGGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACGGAAGTTCTGCGAGATTCTTTTGTTGGTAATTCGCGCACTGTAATGATATCATGCATTTCACCTAGCTCAGGTTCGTGCGAGCATACTCTTAACACGTTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAAAGGGAACAACTCTAGAAGGGATCCTCTTTCTTCCTCAAACTTGAGAGAGTCCACTGTGTTGCCTGGGTCTTCAATTTTAGCTCACGATGATACCTTGGAGGATGAAATAACGCATGTTTCCAGTGACAGGAATCGATTTGGTTGGCCCAAACATTCAGAAAGAGAACCCTCTCCTCCAAATAATGTGGACCGTGTCCCAAGTGGTAGAATGGGGGGAAATTTGGCGCCATCTGTGTATTCTGATCCACCAAACGGTCCAAGAGGTAGTCAAAATGACAGAACCGCAAATGAATATGATTACATAGGACCCATATATGAACAAGACAGAACAAGAAAAACGATTAAGAGGGTGGATAACAACCACTTATCAGGTTTTGAGGAGAAGAAGAAGATAGAATCTCGTGTTAATGTTGATGCATCACATTTTCAGACTAATCATTCTGATCCGGATGATAATTTAAATGCCCTCCTGAAGGAAGAGGAAGATCTAGTAACAGCTCATCGTAGACAGGTGGAGGAAACCATAGACATTGTTAGAGAGGAGATGAATTTACTTGCTGAAGCGGACCAACCAGGAAATCAATTGGATGATTATATTTCCAGATTGAATACCCTTTTATCACAAAAGGCTACAGGAATCTTTCAATTGCAGACACAGTTGGCTCAGTTTCAGAGACGTTTAAACGAGTATAATGTTTTCGTATCTTCTAGTAATTGA 2097 0.4158 MSVIGRAMPRSNSAAHHHRQSSDNFILDAHRNWLQSSTFAQEFGTRSSSLRKIDDDRVLSSGLLDLHSLDTELLPETYGDHNEYLTNHTVRGQSFDDYESILPGNKHGQRSRGLPENNFLKSVPTEKERANNVAKIKVAVRKRPLNKKEIAKREEDIISIDSNFLTVHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHNTYWNQGFQLFVSFFEIYGGKLFDLLNDRKKLFMREDGKQQVCIVGLQEYRVSKVETINEFIEKGNASRSTGTTGANEESSRSHAILQLCIKRSVDGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNSRRDPLSSSNLRESTVLPGSSILAHDDTLEDEITHVSSDRNRFGWPKHSEREPSPPNNVDRVPSGRMGGNLAPSVYSDPPNGPRGSQNDRTANEYDYIGPIYEQDRTRKTIKRVDNNHLSGFEEKKKIESRVNVDASHFQTNHSDPDDNLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLAEADQPGNQLDDYISRLNTLLSQKATGIFQLQTQLAQFQRRLNEYNVFVSSSN 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00205 698 Coils Coil 628 648 - -
Viun4g00205 698 MobiDBLite consensus disorder prediction 462 480 - -
Viun4g00205 698 Pfam Kinesin motor domain 141 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 MobiDBLite consensus disorder prediction 457 486 - -
Viun4g00205 698 ProSitePatterns Kinesin motor domain signature. 357 368 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun4g00205 698 FunFam Kinesin-like protein 117 461 - -
Viun4g00205 698 PANTHER KINESIN-RELATED PROTEIN 6 44 692 IPR027640 GO:0003777|GO:0007018
Viun4g00205 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 458 IPR027417 -
Viun4g00205 698 MobiDBLite consensus disorder prediction 502 518 - -
Viun4g00205 698 SMART kinesin_4 133 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 MobiDBLite consensus disorder prediction 502 556 - -
Viun4g00205 698 Gene3D Kinesin motor domain 116 461 IPR036961 -
Viun4g00205 698 PRINTS Kinesin heavy chain signature 358 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 PRINTS Kinesin heavy chain signature 215 236 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 PRINTS Kinesin heavy chain signature 324 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 ProSiteProfiles Kinesin motor domain profile. 135 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun4g00205 698 CDD KISc_KIF2_like 135 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00205 Viun-Chr4 1152818 1158048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00205 134 458 Calmodulin-binding Proteins AT5G65930 34.627 8.38e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00205 K10393 - gmx:100783382 1203.35