Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00194 ATGTTTGGGGCTGAGGATCTTTGGGCGAAAGGGTACACCGGTGCCAAGGTCAAGATGGCTATATTTGATACTGGCATTCGAGCTGATCATCCTCACTTTCGTAACATCAAGGAACGTACTAATTGGACGAATGAAGATACGTTGAATGACAATCTTGGACATGGGACTTTTGTTGCGGGTGTAATTGCTGGTGTAGATTCTGAGTGCCTTGGTTTTGCACCAGACACAGAGATTTATGCATTTCGAGTGTTCACTGATGCACAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGTTAAATTTGAGCATAGGTGGGCCTGATTACTTGGATCTCCCGTTTGTTGAAAAGATATGGGAGATAACAGCAAATAATATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCCGATCAGAGTGATGTCATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACATGGGAGCTTCCTCATGGTTATGGCCGCGTGAAGCCAGACATAGTTGCATATGGACGGGACATTATGGGATCAAAAATTAGTGCAGGGTGTAAAAGCTTATCTGGAACTAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTCAGCGTCATTCCTGAACCTGAGAGAAAAAGTATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTTACTGGTCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGCATCATATGAGATTCTTAAGAGCTACAAACCTAGGACAAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCATTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTGATTGGATACGTTGAAAGTCCACCAAAATGGCACCCTTTTGATGAAGATGGGAATCTTCTAAGCATACATTTTACTTATTCTGAGATAATTTGGCCTTGGACTGGTCATTTGGCTCTTCACATGCAGATCAAGGAAGAAGGTGCACAGTTTTCTGGTAAGATTGAAGGTAATGTGACTCTCAAGGTTTCTAGCCCCCCAGCTCAAGGAGAGAAGGACCCTCGAGTTAGCATCTGTGTGCTTCAATTAAAATTAAATGTGGTACCAACACCACAACGATCTAAACGAATTTTGTGGGATCAGTTTCATAGTATCAAATACCCTCCTGGATATATTCCTAGAGATTCCTTGGACGTTCGCAATGACATTCTTGACTGGCATGGGGATCATCTGCATACAAATTTTCATATCATGTTCAACATGTTACGAGATGCTGGTTATTATATTGAAACACTTGGTTCTCCTCTTACATGCTTTGACTCTCGGCATTATGGTACACTTCTGTTGGTGGATCTTGAGGATGAGTACTTTCCTGAGGAGATTGAAAAACTAAGAGATGATGTTGTAAATACTGGTCTGGGATTAGCTGTCTTTGCTGAGTGGTATAATGTAGATTCCATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACTCCAGTCACCGGAGGTGCTAACATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTTCACTTTTGGGTGAGCAGAATCGGTATGCATCTGGGACAAATATAGTGAGGTTTCCAAGGGGTGGTTATGTTCATAGCTTTCCCTTCTTAGATAGTTCAGAAAGTGGAGCCACACAGAGTGTGCTGCTAACTTCCGGCTCAACCAAGGCAGATTCTCCAATTCTTGGTCTCATGGCAATGGGCGAAGGTCGCATAAGTGTCTATGGGGACTCCAATTGTTTGGACAGCAGTCATATGATAACAAATTGTTTTACCCTTCTGAGGAAAATACTGGATTTTACCAGTGAAGATGTTAGAGATCCAACACTTTTCTCCGATTCAATTAAACAAGACTCTCCCTTGTATGAAGCTGACAATCGGTTGCCATCCCGCAGAACTGATGTAAATTTCTCTGCGTATTCAGCTATTGTGGGTAAGGAATTGATCTGTGGAAGTGACACAAGGTTTGAAATCTGGGGAACTAAGGGCTACAACTTGCAAGTGAGAGGAAGAAATAAAAGACTACCCGGTTTTCCTGTCATTGATTTGGGAAGGGGTTTCAATTCATCCTCTGCCACTTCTAACATTAAGCGGCCTAGGTTGACTGTAAGAAGAAAGGGTGATTCTCTGGGGAATAGGTACTTAGGCCTGTTCTATGGAGATGAGCCTGATGCACCTGTGCTGGTTGTTGGTCATTGGTTGGTTCCTTTTGTTGTTGCAGTAACCGGTATTTTGCTATTGAGTTTTTGGCGCATTCGCCAAAAGAGGCGTAGACGAAGGAAAGGATCAAGTTCTGGTAGATTGGCCAATATAGTTTAG 2553 0.4269 MFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDSECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPEPERKSILNPASMKQALVEGAAKLTGPNMYEQGAGRVDLLASYEILKSYKPRTSIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYVESPPKWHPFDEDGNLLSIHFTYSEIIWPWTGHLALHMQIKEEGAQFSGKIEGNVTLKVSSPPAQGEKDPRVSICVLQLKLNVVPTPQRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFDSRHYGTLLLVDLEDEYFPEEIEKLRDDVVNTGLGLAVFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLGEQNRYASGTNIVRFPRGGYVHSFPFLDSSESGATQSVLLTSGSTKADSPILGLMAMGEGRISVYGDSNCLDSSHMITNCFTLLRKILDFTSEDVRDPTLFSDSIKQDSPLYEADNRLPSRRTDVNFSAYSAIVGKELICGSDTRFEIWGTKGYNLQVRGRNKRLPGFPVIDLGRGFNSSSATSNIKRPRLTVRRKGDSLGNRYLGLFYGDEPDAPVLVVGHWLVPFVVAVTGILLLSFWRIRQKRRRRRKGSSSGRLANIV 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00194 850 CDD Peptidases_S8_SKI-1_like 8 264 IPR034185 -
Viun4g00194 850 Pfam Subtilase family 15 264 IPR000209 GO:0006508|GO:0008236
Viun4g00194 850 FunFam subtilisin-like protease SBT6.1 1 280 - -
Viun4g00194 850 SUPERFAMILY Subtilisin-like 2 277 IPR036852 GO:0004252|GO:0006508
Viun4g00194 850 PANTHER PEPTIDASE S8 12 268 - -
Viun4g00194 850 Gene3D Peptidase S8/S53 domain 1 282 IPR036852 GO:0004252|GO:0006508
Viun4g00194 850 PRINTS Subtilisin serine protease family (S8) signature 50 63 IPR015500 -
Viun4g00194 850 PRINTS Subtilisin serine protease family (S8) signature 217 233 IPR015500 -
Viun4g00194 850 PRINTS Subtilisin serine protease family (S8) signature 14 33 IPR015500 -
Viun4g00194 850 ProSitePatterns Serine proteases, subtilase family, histidine active site. 54 64 IPR022398 -
Viun4g00194 850 ProSitePatterns Serine proteases, subtilase family, serine active site. 218 228 IPR023828 -
Viun4g00194 850 ProSiteProfiles Serine proteases, subtilase domain profile. 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00194 Viun-Chr4 1012720 1018512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00194 88 847 Subtilisin-like Serine Gene Family AT5G19660 78.851 0.0 1229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00194 K08653 - gmx:100819188 1612.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00194 4 1012720 1018512 Viun4g00194 4 1012720 1018512 ECH