Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00187 ATGTATAGACCATTCATGACATGTGATGATCCAAAAGGGGTAGTTGAGTGTGGGGCTATAAGGAAATACAGGACCAGTTCTCAGAAAATGAAGGACAAGACAAAAACTAGGAGGCCGGCAGAGACATCATTGGCTAACAAACAAGACAAAGATGAGAAGGTTTCAAAAGGGTCCGAAGAAAGGTGTTTTGATCCATCATCCTTGCAGCTCATGGAGGTTTCTAGAGGAGCTCAAAGGTTGAACAACATGATTGATTCATGGTCCAGGGGTCTCAGGTACGATGGAAGTTCTGAAGATATAGCAAAAGATTTGCTAAAAGGTGCTCTTGACCTGCAAGAATCTCTGCTAATGCTTCGCAAGGTGCAAGAAGCTTCACAACACATGGCTACCTTGAAGAGAAGACAAAATGTGAAACCTGAAAGTAGCAGATTTGATGCAATGCCGAGTGATGGAACTGCACATTGTGATCACTTTGGTGAACAAAGTTATCCAATGGGATTTCAAAGACGTTGGCCTTCAGCTGATGGTTCTTCAAGTAGCTGCACTGAGGAGCTTAAGAAAGTGATTAAGGAGAGCCTGGTTAGTCAAAATTTGTTCACAACCACTGAAGGGTTGGATTCAGCATCCACATTCCACTCCACAAACTCAAGCCAATCTTCTGGGGCTTGGAATGATAAGCTTTCTGATTCTTCTTTCTCACCAACAACTTCAAGGAGGGAAAGACGATCCAATCTTGTTGCCAAGCTGATGGGTTTGGAAGAAGCTCCTTCAAGATCATTTTCAGCTGTTATGCACAAACAGCTGGAGAGTCCAAAGATTCTGAATCAGAAGAGACATGTATTTGACATAGATATGCCTAAGGTGAGAAAAAATGTTGAGAATGTTAATGTTAATCTCGAACGTAAGATGACCTTGAAGGAAATTCTAGAGACTACTCATTTCAATGGACTTTTGAAGAAGAGTCCTGTCAGAGAGCCTAATGTTCATGTTCATCCTTCCTTCGATGCACACTACAAACATGTTGGTGATTTACCTCCTATTGTACTTATGAAACCTCGATGTAGTCCATATCAGGAATGTGTCAACAGTTATGAGCATGTTGTTCCTCCAGAAAAGGTATCCCTCAGAAATCTAAAAGCAAAAGTTGTCCCTTCCAAAGTGTTCCAACACAAGGAAGATTCAACCACCAACGTGGGGAGAAAAATGGAAGAACATGTATCCAAAAAACTTGTCAAAGAGGAAAGAACTAAGCTTGTCAGAGAGGTTGTGGAGTTGAAGGAGAAAGAAATCAAGCCTATTGAAAATGAGAAGGCTCCAGGAGTTAAGGTAAAACTGCATAGTCATGTCAGTCACAAATCACATGTAAATGAAAGTGCTGATAGAAAAGCTAAGGTAAAGACCATTGCCACTAGTAGAAAGCTTTCAGAAAAGGAGGTTTCAAAATCCAAACATCAACAACAAAATCTTATACCAGTAGTTGAGGTTTCCAAACCCAAAGTTGTGGCAAAATCCCAAGAAGATCAAGGAGAAATCAGCTCTACAAGTACCAAGATTAGGAAGCCGCAAAGTGGCTCCCGAAGTGAAAAGAATGAGACTCCCAACAGAAGGAGCACTGTTTCAAATTCAAGTACTATCTCAAAACCAAAGAGCCAAAAGATTAGTTATTCCAAGGAACAGAAAAAGAAACAGATGAAGAAGCAAAATCCTGCTGTTGTTCAGTCAGAAGCAGCTAAACCAGTTGATGAACAGTTAGTCCAAGAAGAAGCAATGAGTGTTGCTGTATCTCATAAAGATGATTGCCCTGAGATTAGAATAATAACTACAATAACAAATGATCTTGCGATGGAGCATGAAGAAATATATGCATCTTCAAGTAAGATTAGAGAAGTTTCTGAGCAAAACGAGAGATCTTCTAGTGATGATTACTTTATGGTCAAGTCTGAACGTGAAAATGATGCCATTCTTGCTGAGAAAGCTCATGACAGCATCAATATCAGTGAAACAGATTACAAGCCTGAAAAAGAGAGTTCCGAGCTCAAATATTTACTTCTGACAAATCAATCATTTATTGAGCATGCAGAGAAGTTCCTGAATCTTGATGTTGACTGTTCCAAGCTCCTACCAAAAAGTGAAACTAAGCAAATATCCAATCTCATACTCTATTTGGACTGTGCAAATGAAGTAACTGAGCGTAAAAGCTTGCAGGGATCACAAGCAGTTAACCCTTTATTGCTAACTTGTGCGGGGAATCCAAGATTGCACATTTCTTTAGGGAGGTTGGTTGATGAAGTGTGTAGTGGCATTGAGCAGTTAACATGTTACAGTGAAAAAGTGGGTTCAGATAATATATATGAAATGATGGAGAGAGATATAAAGGGAAACAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAGTTGTGAATGAAGTAGAGAATCTAGTTTTAGGTGGATTGATTGAAGAGATAATTGTAAATTTATGA 2505 0.3968 MYRPFMTCDDPKGVVECGAIRKYRTSSQKMKDKTKTRRPAETSLANKQDKDEKVSKGSEERCFDPSSLQLMEVSRGAQRLNNMIDSWSRGLRYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASQHMATLKRRQNVKPESSRFDAMPSDGTAHCDHFGEQSYPMGFQRRWPSADGSSSSCTEELKKVIKESLVSQNLFTTTEGLDSASTFHSTNSSQSSGAWNDKLSDSSFSPTTSRRERRSNLVAKLMGLEEAPSRSFSAVMHKQLESPKILNQKRHVFDIDMPKVRKNVENVNVNLERKMTLKEILETTHFNGLLKKSPVREPNVHVHPSFDAHYKHVGDLPPIVLMKPRCSPYQECVNSYEHVVPPEKVSLRNLKAKVVPSKVFQHKEDSTTNVGRKMEEHVSKKLVKEERTKLVREVVELKEKEIKPIENEKAPGVKVKLHSHVSHKSHVNESADRKAKVKTIATSRKLSEKEVSKSKHQQQNLIPVVEVSKPKVVAKSQEDQGEISSTSTKIRKPQSGSRSEKNETPNRRSTVSNSSTISKPKSQKISYSKEQKKKQMKKQNPAVVQSEAAKPVDEQLVQEEAMSVAVSHKDDCPEIRIITTITNDLAMEHEEIYASSSKIREVSEQNERSSSDDYFMVKSERENDAILAEKAHDSINISETDYKPEKESSELKYLLLTNQSFIEHAEKFLNLDVDCSKLLPKSETKQISNLILYLDCANEVTERKSLQGSQAVNPLLLTCAGNPRLHISLGRLVDEVCSGIEQLTCYSEKVGSDNIYEMMERDIKGNNGIWNWGWRHGFSADEAEQVVNEVENLVLGGLIEEIIVNL 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00187 834 MobiDBLite consensus disorder prediction 207 241 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 450 483 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 25 60 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 506 521 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 207 240 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 446 580 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 25 61 - -
Viun4g00187 834 Coils Coil 408 428 - -
Viun4g00187 834 PANTHER OS01G0228800 PROTEIN-RELATED 1 833 - -
Viun4g00187 834 MobiDBLite consensus disorder prediction 534 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00187 Viun-Chr4 967108 971338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00187 670 831 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.768 1.13e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00187 - - gmx:100797863 1235.71