Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00167 ATGCATAGAAGTGTTGTTCAGAGCTCACCAGTGCAACAAATGATGGCTGGAAACCCTAACTGGTGGAACATCAATATCAACACCATGCCTCCACAACAACCTTCTCCTTTCTTCTCCTCTCCTTCAAACTTTCCCATCCCTTATGCTGCTCCTTCTTCTCTTCCCTTTCCTTCTTGGAACGAAAATCAAGACCTTCCTGAATCATGGAGCCAGTTACTCATGAGTGGAGTGGTGGATGAACAAGGAAAAGTTGGGATGGGACAGTTTCAGACGAAGAAGATGGAGAACTGGGAGGATCAAATGCTAGGTCAAGCTCAAAACGCTTCTCTGGTTGATGTTAAACAAGAAAATTCGGTTAACAGTTATGTATATGGCCATGGAAACGAAGAGCTTCAGTCATCAAAACCATCTTGGTCTCCGAAATCATCATGTGCCACAAGTTTCAGTAGCAACATGTTAGATTTCTCTAACAGTAACACAGATGCAAGACATCCTCCACCAGATCGATCTTCTGAGTGCAATAGCAGTGCAGGTGGTGGGGCACTGAAGAAAGCTAGGGTTCAACCCTCTGCTACAACACAGGCTACATTCAAGGTTAGGAAGGAGAAGCTAGGTGACAGAATTACAGCTCTTCATCAACTCGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGAGCGGTGGACCAGGGAGTGGGAGGCAGCAGAATTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATAATGAGAACAGCTTGAAAAGGAAAGCAGCTGGAGAACCGGAAACTGAAGAAGAACAAAAGAAGGGGCTGAGGAGTAGAGGGTTGTGTCTGGTTCCAGTGTCATGCACACTGCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCACCTGCCCTCGGAGGGGGCTTTCGTTAG 1011 0.4619 MHRSVVQSSPVQQMMAGNPNWWNININTMPPQQPSPFFSSPSNFPIPYAAPSSLPFPSWNENQDLPESWSQLLMSGVVDEQGKVGMGQFQTKKMENWEDQMLGQAQNASLVDVKQENSVNSYVYGHGNEELQSSKPSWSPKSSCATSFSSNMLDFSNSNTDARHPPPDRSSECNSSAGGGALKKARVQPSATTQATFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSGGPGSGRQQNSVQGEKNCIFPEDPGQLLNNENSLKRKAAGEPETEEEQKKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00167 336 MobiDBLite consensus disorder prediction 155 193 - -
Viun4g00167 336 MobiDBLite consensus disorder prediction 155 177 - -
Viun4g00167 336 FunFam transcription factor bHLH68 isoform X1 195 248 - -
Viun4g00167 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 188 237 IPR011598 GO:0046983
Viun4g00167 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 63 318 - -
Viun4g00167 336 Gene3D - 188 247 IPR036638 GO:0046983
Viun4g00167 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 248 IPR036638 GO:0046983
Viun4g00167 336 CDD bHLH_AtbHLH_like 196 245 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00167 Viun-Chr4 886992 891079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00167 1 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.020 2.33e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00167 - - gmx:100786555 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00167 4 886992 891079 Viun4g00167 4 886992 891079 ECH
Viun3g00286 3 1649300 1652593 Viun4g00167 4 886992 891079 PCT