Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00146 ATGGCTTCTTCGATTCGTCCCTCACTTTCTTCCTTCATGTTACCCTCCTTCTCTTCTTGCAACCCTTCTCAAAAGTTCTCTCTTTTTCATCTCGGTAGCGGTATTAGACGGTTTCACAATTTTGGCCTGAAACCTTCTAAGTTTTTGAGGCATGATGATGATCACTGCATGAGGGCGAAGGCATCTGGGAACACATCCTCAACTGCTGCACCGGAAAATGCGCTGGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAAGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGTTGCTCAGACAGCGTGACATGCAAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTGTTGAACTTACATACAATTATGGGGTTGACAAGTATGACATTGGCGATGGATTTGGTCATTTTGGTCTTGCTGTTGATGATATTTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGAAAAATTACTCGAGAGCCTATGCTTATCAAGGGAGGCAACTCAGTGAATGCATTCATTGAAGATCCTGATGGTTATCAATTTGAACTTTTAGAAAGGCCTCCCTCTCCCGAGCCTTTGTGCAAAGTAATGCTTCGAGTTGGTGATCTTGACCGTTCCATCAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAAGATGATCCAGAATCCAAGAACACAATAGCAATACTGGGATATGGTCCAGAGGAAAAAAGTACTGTCCTGGAGTTAACTTACAACTATGGAGTCACAAAATACGCTAAAGGAGATGCTTATGCTCAGATTGCAATTGCTACAGATGATGTGTACCAAACTGCTGAAGCAATTAAACTTGCTGGAGGGAAGATTACTCGGGAACCTGGACCAATACCTGATATAAAGACAAAGATCACATCATGTGAGGATCCAGATGGTTGGAAAACTGTTTTTGTAGATAATATTGACTTCAGCAGGGAGCTGGAGTAG 1041 0.4256 MASSIRPSLSSFMLPSFSSCNPSQKFSLFHLGSGIRRFHNFGLKPSKFLRHDDDHCMRAKASGNTSSTAAPENALDWVKHDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRQRDMQEQRHTNAFLGYGPEDAHFAVELTYNYGVDKYDIGDGFGHFGLAVDDISRIVELVRAKGGKITREPMLIKGGNSVNAFIEDPDGYQFELLERPPSPEPLCKVMLRVGDLDRSIKFYEKAFGMELLRTQDDPESKNTIAILGYGPEEKSTVLELTYNYGVTKYAKGDAYAQIAIATDDVYQTAEAIKLAGGKITREPGPIPDIKTKITSCEDPDGWKTVFVDNIDFSRELE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00146 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Viun4g00146 346 NCBIfam lactoylglutathione lyase 84 208 IPR004361 GO:0004462|GO:0046872
Viun4g00146 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 216 338 IPR029068 -
Viun4g00146 346 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Viun4g00146 346 PANTHER LACTOYLGLUTATHIONE LYASE 61 346 - -
Viun4g00146 346 CDD GlxI_Ni 85 206 - -
Viun4g00146 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Viun4g00146 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 332 IPR004360 -
Viun4g00146 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Viun4g00146 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Viun4g00146 346 FunFam Lactoylglutathione lyase 211 346 - -
Viun4g00146 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Viun4g00146 346 Gene3D - 56 208 IPR029068 -
Viun4g00146 346 Gene3D - 211 346 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00146 Viun-Chr4 746889 752809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00146 217 335 Calmodulin-binding Proteins AT1G08110 27.397 6.39e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00146 K01759 - gmx:100781439 597.045