Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00145 ATGGCTTCTTCGATTCGTCCCTCACTTTCTTCCTTCATGTTACCCTCCTTCTCTTCTTGCAACCCTTCTCAAAAGTTCTCTCTTTTTCATCTCGGTAGCGGTATTAGACGGTTTCACAATTTTGGCCTGAAACCTTCTAAGTTTTTGAGGCATGATGATGATCACTGCATGAGGGCGAAGGCATCTGGGAACACATCCTCAACTGCTGCACCGGAAAATGCGCTGGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAAGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAGTTGCTCAGACAGCGTGACATGCAAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCACACTTTGCTGTTGAACTTACATACAATTATGGGGTTGACAAGTATGACATTGGCGATGGATTTGGTCATTTTGGTCTTGCTGTTGATGATATTTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGAAAAATTACTCGAGAGCCTATGCTTATCAAGGGAGGCAACTCAGTGAATGCATTCATTGAAGATCCTGATGGTTATCAATTTGAACTTTTAGAAAGGCCTCCCTCTCCCGAGCCTTTGTGCAAAGTAATGCTTCGAGTTGGTGATCTTGACCGTTCCATCAAATTTTATGAGAAGGCTTTTGGTATGGAGCTACTTCGAACACAAGATGATCCAGAATCCAAGAACACAATAGCAATACTGGGATATGGTCCAGAGGAAAAAAGTACTGTCCTGGAGTTAACTTACAACTATGGAGTCACAAAATACGCTAAAGGAGATGCTTATGCTCAGATTGCAATTGCTACAGATGATGTGTACCAAACTGCTGAAGCAATTAAACTTGCTGGAGGGAAGATTACTCGGGAACCTGGACCAATACCTGATATAAAGACAAAGATCACATCATGTTTTTGTAGATAA 987 0.4225 MASSIRPSLSSFMLPSFSSCNPSQKFSLFHLGSGIRRFHNFGLKPSKFLRHDDDHCMRAKASGNTSSTAAPENALDWVKHDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRQRDMQEQRHTNAFLGYGPEDAHFAVELTYNYGVDKYDIGDGFGHFGLAVDDISRIVELVRAKGGKITREPMLIKGGNSVNAFIEDPDGYQFELLERPPSPEPLCKVMLRVGDLDRSIKFYEKAFGMELLRTQDDPESKNTIAILGYGPEEKSTVLELTYNYGVTKYAKGDAYAQIAIATDDVYQTAEAIKLAGGKITREPGPIPDIKTKITSCFCR 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00145 328 Gene3D - 56 208 IPR029068 -
Viun4g00145 328 CDD GlxI_Ni 85 206 - -
Viun4g00145 328 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Viun4g00145 328 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Viun4g00145 328 Gene3D - 211 328 IPR029068 -
Viun4g00145 328 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 328 IPR037523 -
Viun4g00145 328 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Viun4g00145 328 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 314 IPR004360 -
Viun4g00145 328 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Viun4g00145 328 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Viun4g00145 328 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 216 318 IPR029068 -
Viun4g00145 328 NCBIfam lactoylglutathione lyase 84 208 IPR004361 GO:0004462|GO:0046872
Viun4g00145 328 PANTHER LACTOYLGLUTATHIONE LYASE 61 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00145 Viun-Chr4 746887 752809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00145 217 312 Calmodulin-binding Proteins AT1G08110 24.793 4.46e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00145 K01759 - gmx:100781439 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00145 4 746887 752809 Viun4g00145 4 746887 752809 ECH
Viun3g00302 3 1741794 1746920 Viun4g00145 4 746887 752809 PCT