Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00030 ATGACCAACTTTGCCAACTTCAATCAAAAACATCATCGTTTTTGTAGTTTTTTTCCACACAGTCTCAGATTCCTGCTCCGTTTTGTGGCCTTCCATGTCCACCCCTTCTTTATTCAACTCTGTTATTTTGGGATACTTTCTCTGCTTGGTTACCTCGCTCTCAAGAACTCAAACCCAAGAACCCCCGTTAGACCAAATGACCTTGACCTCTTTTACACCTCTGTTTCTGCTTCCACTGTTTCTAGCATGGTGGCGGTGGAAATGGAGGTTTTCTCCAATTCTCAGCTCATTCTCCTCACCTTTCTCATGTTTGTTGGCGGGGAAGTTTTCATTTCCATGCTTGACCTTCTATTTGCCAGGTATAAATTCAGAAACAGAGTTAGCACCAATCACTTTCCACCCACACCAGAGAAGCCCCAAGTTCATGACAACCATGTTGAGCTCGGTTTAATCTCTATTCCTCAACCTCAATCTGAAAACCAAAAACCTAGTCACACTAACGTTCCCTTTAAGGACACTGATACACTTACGTATAACTCTCTTACTTATCTAACTCTCGTAGTTTTAGGTTACTTTGTGGTGGTTCAATTGGTTGGCTTCAGTTTGGTGTCTATGTACATGACCTTAGTACCAAGTGCAAGACAAGTACTGAAAAACAAAGACATTAAGATTGCAACATTTTCTTTGTTCACCATAGTTTCCACTTTTGCCAGCTGTGGTTTTGTCCCAACCAACGAAAACATGATGGTTTTCAAGAAGAGTTCGGGGCTTCTCCTCCTTATCCTACCACATGTGTTTCTAGGTAACACCCTTTACCCTCCATGTTTGAGGCTGGTGATTATGGGTCTAAGAAAGGTGAGCAGAAGAGAGGAATTCTCGCACATGCTGAAGAATTTCAAAGACATTGGCTATGATCATATGCTGTCTGGTCTTCATTGTTGCTTCCTGGTTGCTACTGTTCTGTGTTTGAATGTTATACAGTTTGTGATGTTTTGGTCGATGGAGTGGAACACGAAAACTATGGAGGGTTTGAATTTTTACGAGAAAGTGGTGGGGTCGTTGTTCCAAGTTGCAAATGCCCGACACGCTGGTGAGTCTGTGTTCGATCTGTCTTCACTGTCTTCAGCCATACTGGTGGTCTTCGTTGTGATGATGTACCTTCCGCCGTACACTTCATTTTTACCTGTAATGGAGGAGAAAAATGATGGCAAGAGAAAACGAAAAAGCGCAGTGGAGTGTGTTGTGTTTTCTCAACTCTCTTATTTGGCGATTTTCGTTATTCTGGTTTGCATCACTGAGAGCAGAAGCTTGAAAGAGGATCCACTCAACTTTAACGTGCTCAACATCACCCTCGAAGTCATCAGTGCTTATGGGAACGTAGGGTTCTCAACGGGATACAGCTGCGCCAGGCGATTGAAAGACGATGGCACCTGCAGAGATTCATGGGTTGGGTTTTCTGGAAGATGGAGTAACAAAGGAAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAACATGAAAGGTGGCAAAGCGTGGCACCTCTCTTAG 1563 0.4325 MTNFANFNQKHHRFCSFFPHSLRFLLRFVAFHVHPFFIQLCYFGILSLLGYLALKNSNPRTPVRPNDLDLFYTSVSASTVSSMVAVEMEVFSNSQLILLTFLMFVGGEVFISMLDLLFARYKFRNRVSTNHFPPTPEKPQVHDNHVELGLISIPQPQSENQKPSHTNVPFKDTDTLTYNSLTYLTLVVLGYFVVVQLVGFSLVSMYMTLVPSARQVLKNKDIKIATFSLFTIVSTFASCGFVPTNENMMVFKKSSGLLLLILPHVFLGNTLYPPCLRLVIMGLRKVSRREEFSHMLKNFKDIGYDHMLSGLHCCFLVATVLCLNVIQFVMFWSMEWNTKTMEGLNFYEKVVGSLFQVANARHAGESVFDLSSLSSAILVVFVVMMYLPPYTSFLPVMEEKNDGKRKRKSAVECVVFSQLSYLAIFVILVCITESRSLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCARRLKDDGTCRDSWVGFSGRWSNKGKFILILVMFFGRLKKFNMKGGKAWHLS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00030 520 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 27 520 - -
Viun4g00030 520 Pfam Cation transport protein 414 469 IPR003445 GO:0006812|GO:0008324|GO:0055085
Viun4g00030 520 Pfam Cation transport protein 173 387 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00030 Viun-Chr4 163537 167878 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00030 55 519 Inorganic Solute Cotransporters AT4G10310 49.174 1.25e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00030 K24976 - gmx:100779582 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00030 4 163537 167878 Viun4g00030 4 163537 167878 ECH