Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00029 ATGAACAACAAACTGATCTTGTTTCTTTCTACTCTTTTCCCACGCACCCTTCGTTTTCTACCCTTCCATTTCCACCCTTTCTTCTTTCACCTTTTCTATTTCCTCGTTCTTTCTGTCGTAGGTTTTCTCGGTCTCAAGGTTTCAAAACCAAGGACCCCTTCTAACCCTAATGACTTGGACCTCTTCTACACCTCAGTTTCTGCTTCCACAACTTCTAGCATGGTAGCCCTAGAAATGGAGCTTTTCTCCGATTCTCAACTTATTCTCCTCACCCTCCTCATGTTTCTTGGCGGGGAAGTTTTCACTTCCGTGCTCGATCTTCTACTTGCTAGGAATAAACTCATCCACAACAAATTACTCAGCATCAATCCTTCTTCACCCTCAGATGAGTCCCCGACCCATGCCACTCACATTGAGCTTGGTCTAGTTTCTGTTCCTTACTCACAATCACAAAACCAGACACAGACACTGTCTGATAATGTTGTATCCGTTAGACTTAAGTATAACTGTCTTCGTTATCTGACTTACGTTGTGTTAGGTTACCTTGTGGTGGTTCAGTTTGTTGGCTTTAGTTTGGTGTCTTTGTATATGACTGTGGTAACGAGTGCAAAACAAGTACTGCAAAAAAAAGGCATTAACGTTGTAACATTTTCTTTGTTTACCGTCGTTTCTACTTTTGCCAGTTGTGGCTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAACAATTCTGGGCTTCTCCTCCTTATTCTCCCACATGTGTTTCTAGGTAACACCCTTTATCCACCGTGTCTCACACTTGTGCTGATGGTTTTGGAAAAAGTTACCGGAAAAGAGGAATTTTCACAGTTGCGGAAGAATCCCAACAACCTGGGCTACAGACATTTGCTTTCTGTTTATCGTTGTTGCCTCCTGGTTGGTACTGTGTTTGGTTTGAACGTTATACAGTATGTGATGTTCTGGTCGGTGGAATGGAATTCCACAATCATGGAGGGTATGAATTTGTACGAGAAAGTGGTAGCGTCGTTGTTTCAAGTTTCAAACGCCAGACACGCTGGTGAATCTGTTTTTGATCTCTCCTCCATCTCTTCAGCCATATTAGTACTCTTCATTGTGATGATGTACCTTCCGCCGTACACTTCATTTTTACCTGTAAGAGAGGAGAAAAATGATGGTAAGAGAAAACGAAAAAGCGCAGTGGAGTGTGTTGTGTTTTCTCAAGTCTCTTATTTGGCCATTTTCGTTATTCTGGTTTGCATCACTGAGAGCAGAAGCTTGAAAGAGGATCCACTCAACTTTAACGTGCTCAACATCACCCTCGAAGTCATCAGTGCTTATGGGAACGTAGGGTTCTCAACGGGATACAGCTGCGCCAGGCGATTGAAAGACGATGGTACGTGCAGAGATTCATGGGTAGGGTTTTCTGGAAGATGGAGTAACAAAGGAAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAACATGAAAGGTGGCAAAGCGTGGCACCTCTCTTAA 1533 0.4305 MNNKLILFLSTLFPRTLRFLPFHFHPFFFHLFYFLVLSVVGFLGLKVSKPRTPSNPNDLDLFYTSVSASTTSSMVALEMELFSDSQLILLTLLMFLGGEVFTSVLDLLLARNKLIHNKLLSINPSSPSDESPTHATHIELGLVSVPYSQSQNQTQTLSDNVVSVRLKYNCLRYLTYVVLGYLVVVQFVGFSLVSLYMTVVTSAKQVLQKKGINVVTFSLFTVVSTFASCGFVPTNENMMVFKNNSGLLLLILPHVFLGNTLYPPCLTLVLMVLEKVTGKEEFSQLRKNPNNLGYRHLLSVYRCCLLVGTVFGLNVIQYVMFWSVEWNSTIMEGMNLYEKVVASLFQVSNARHAGESVFDLSSISSAILVLFIVMMYLPPYTSFLPVREEKNDGKRKRKSAVECVVFSQVSYLAIFVILVCITESRSLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCARRLKDDGTCRDSWVGFSGRWSNKGKFILILVMFFGRLKKFNMKGGKAWHLS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00029 510 Pfam Cation transport protein 402 459 IPR003445 GO:0006812|GO:0008324|GO:0055085
Viun4g00029 510 Pfam Cation transport protein 167 377 IPR003445 GO:0006812|GO:0008324|GO:0055085
Viun4g00029 510 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 23 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00029 Viun-Chr4 155303 157692 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00029 46 509 Inorganic Solute Cotransporters AT4G10310 49.895 4.53e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00029 K24976 - gmx:100786243 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00029 4 155303 157692 Viun4g00029 4 155303 157692 ECH