Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06186 ATGGCTCCGCTGATCCTGCATGGTGGCAAAACAAACAAAAATTCCTACAAGACACTTATTGCAGCGGAGTACGCCGGCGTCCAAGTTGAATTTGCTCCAAATTTTGAGATGGGTGTATCCAATAAAACTCCTCAATTTCTCCAGATGAATCCTATTGGCAAGGTTCCTGTCTTGGAAACACCCGATGGTCCACTGTGTGAGAGCAATTCCATTGCTCGCTATGTTGCCCGGCTGAGCCCTGACAGCACTTTGTACGGTTCATCTTTGATTCAATACGCCCAGATTGAACAATGGATTGATTTTGCATCACTTGAGATTAATGCCAATATTTTTGTGTGGTATTCCCCAAGAGTTGGACGAGCACCATACCTTCCTCCGGCTGAGGAGGCTGCAATTTCTGCACTAAAGAGAGCTTTGGGTGCTTTGAACACTCACCTTGCATCCAATACTTACGTGGTTGGGCATTCTGTGACCCTGGCTGACATCATATTGACATGCAATTTGTATTTTGGTTTCGCAAACATCTTTATTAAGAGCTTCACCTCTGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAACCAAATTTCCGAAAGATAATTGGGCAGGTCAAGCAGGCCGAGTCTGTTCCACCTGTTCAATCTGCAAAGAAGCCTTCCCAGCCAAAAGAAACTAAGCCTAAGCCCAAAGATGAGCCAAAGAAAGAGGCCAAAAAGGAGCCAGAAAAGCCCAAAGAAGCAGCAGAAGAAGAGGCACCTAAGCCTAAACCCAAGAATCCCCTTGATCTTCTCCCTCCAAGTCCAATGATACTGGATGAGTGGAAAAGACTGTACTCCAACACTAAAACAAACTTCAGGGAGGTTGCTATTAAAGGATTTTGGGACATGTATGATCCTGAGGGATACTCTCTCTGGTTCTGTGATTACAAATACAATGATGAAAATACTGTTTCTTTCGTGACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCTCGCAAGTATGCATTTGGAAAGATGCTAGTGATTGGATCAAATCCACCCTTTAAGGTGAAGGGGCTGTGGCTTTTCCGTGGGCAAGAAATTCCGCAGTTTGTGATCGATGAATGCTATGACATGGAGCTTTACGAGTGGACGAAGGTTGACATATCTGATGAAGCTCAAAAGGAGCGTGTCAATCAGATGATAGAAGATTTCGAACCTTTTGAGGGCGAGGCTCTTCTGGATGCTAAGTGCTTTAAGTGA 1263 0.4442 MAPLILHGGKTNKNSYKTLIAAEYAGVQVEFAPNFEMGVSNKTPQFLQMNPIGKVPVLETPDGPLCESNSIARYVARLSPDSTLYGSSLIQYAQIEQWIDFASLEINANIFVWYSPRVGRAPYLPPAEEAAISALKRALGALNTHLASNTYVVGHSVTLADIILTCNLYFGFANIFIKSFTSEFPHVERYFWTLVNQPNFRKIIGQVKQAESVPPVQSAKKPSQPKETKPKPKDEPKKEAKKEPEKPKEAAEEEAPKPKPKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSNPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEAQKERVNQMIEDFEPFEGEALLDAKCFK 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06186 420 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 260 420 IPR036433 GO:0003746|GO:0006414
Viun3g06186 420 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Viun3g06186 420 FunFam Elongation factor 1-gamma 1 260 420 - -
Viun3g06186 420 Pfam Glutathione S-transferase, C-terminal domain 130 198 IPR004046 -
Viun3g06186 420 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
Viun3g06186 420 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Viun3g06186 420 SFLD Glutathione Transferase (cytosolic) 6 191 IPR040079 -
Viun3g06186 420 CDD GST_N_EF1Bgamma 6 78 - -
Viun3g06186 420 SMART EF1G_2 259 367 IPR001662 GO:0003746|GO:0006414
Viun3g06186 420 MobiDBLite consensus disorder prediction 211 268 - -
Viun3g06186 420 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 260 420 IPR001662 GO:0003746|GO:0006414
Viun3g06186 420 Gene3D - 81 217 - -
Viun3g06186 420 CDD GST_C_EF1Bgamma_like 91 211 - -
Viun3g06186 420 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 4 420 IPR044628 GO:0004364
Viun3g06186 420 FunFam Elongation factor 1 gamma 81 217 - -
Viun3g06186 420 FunFam Elongation factor 1B gamma 3 75 - -
Viun3g06186 420 MobiDBLite consensus disorder prediction 224 260 - -
Viun3g06186 420 SUPERFAMILY eEF1-gamma domain 260 420 IPR036433 GO:0003746|GO:0006414
Viun3g06186 420 Pfam Elongation factor 1 gamma, conserved domain 259 367 IPR001662 GO:0003746|GO:0006414
Viun3g06186 420 SUPERFAMILY Thioredoxin-like 1 86 IPR036249 -
Viun3g06186 420 Gene3D Glutaredoxin 1 75 - -
Viun3g06186 420 SFLD Main (cytGST) 6 191 - -
Viun3g06186 420 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06186 Viun-Chr3 65129942 65132939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06186 4 420 Eukaryotic Initiation Factors Gene Family AT1G57720 72.422 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06186 K03233 - gmx:547637 728.013