Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06175 ATGCATCTAGGTGTTCTGGCCACTGCATCTCATGCCATTGCAACTGGAACACTGTTTTCTGTGTTTTACAAGCCCAGAACAAGCCGGTCAGAGTTTATTGCGAGCGTCAACAAGTATCTGGAAGCTCAGAGTCATAAACTCTCTGTTGGGATGAGATTCATAATGAGATTTGAGGGTGACGAAATCCCCGAAAGAAGGTTCAGTGGGAAAATTGTGGGTGTTGGAGATAATAAATCATCGGTATGGCCTGATTCCGAGTGGCGATCCTTAAAGGTACAATGGGACGAACCATCGTCAATTTTGCGCCCTGATAGAGTTTCTTCATGGGAATTGGAGCCACATGTCTCTACCACTCCTGCAAACCCGCAGCCAACACAAAGAAACAAGAGGGCACGGCCTCTTATTGTACCTTCTACAGTGCCCGATTCTTCTTTGCAAGGCATGTGGAAATATCCCATTGAATCTACAACTTTCTCTTGTGATCCTCAACATAGACGTGGCCTCTATCCATCACCTAAGTTCAATCCTTCTGCAACTAACTTTATTGGTTTTAGTGGGAATAGCTTTGTGGGACCTCCTTCCAACAAATCAATATATTTATCTAATAGGATGGAAAATTCCTTGGAATCAATTTCACCTATAGCCCTTAAAGAAGCTGGAGAGAAGAGAAAAGACACTGGTAATGGCTGTAGACTCTTTGGGATTCAGCTACTAGAGAATTCTAAAGCAGAAGGAAGTCTACAAACAGTCAATTTGTCTGGAAGGCTGGGTGATGATAGGTTTGTTCCATCTTTAGATGGTGAATCTGATCAGCAGTCTGAGCCATCAAATGCCAATCGATGTGATATTCCTTCAGTAAGTTGTGATGCTGAAAAATCATGCCTGTCTCCACAGGAGATGCAAAGCAAGCAAATAAGGAGTTGTACGAAGGTAGTATGGATTAGGTGGTTTAGCATTTCTCTTCAACGATCCAGAAAAAAGTGTACTGTTTTTGAGATTATATATTTATTGCCAGAGTATAGGGCGATGATATTACTCACTTGTGAACTTGTGAAATGCCAGAGTATAGGACAATGA 1077 0.4206 MHLGVLATASHAIATGTLFSVFYKPRTSRSEFIASVNKYLEAQSHKLSVGMRFIMRFEGDEIPERRFSGKIVGVGDNKSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPHVSTTPANPQPTQRNKRARPLIVPSTVPDSSLQGMWKYPIESTTFSCDPQHRRGLYPSPKFNPSATNFIGFSGNSFVGPPSNKSIYLSNRMENSLESISPIALKEAGEKRKDTGNGCRLFGIQLLENSKAEGSLQTVNLSGRLGDDRFVPSLDGESDQQSEPSNANRCDIPSVSCDAEKSCLSPQEMQSKQIRSCTKVVWIRWFSISLQRSRKKCTVFEIIYLLPEYRAMILLTCELVKCQSIGQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06175 358 Pfam Auxin response factor 9 91 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Viun3g06175 358 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 311 IPR044835 GO:0003677|GO:0006355|GO:0009725
Viun3g06175 358 Gene3D - 46 119 - -
Viun3g06175 358 FunFam Auxin response factor 46 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06175 Viun-Chr3 65049957 65052150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06175 1 311 B3 DNA Binding Superfamily AT1G59750 55.238 8.00e-101 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06175 K14486 - gmx:100815450 541.576