Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06152 ATGGATTACGAAGAACCTCCGTCACCGTCTCCCTCTCTCCGTTCTTCCTCTCTTCTGAAGGATATCTCCAACTTCACCACTCCCAGACGACCCCCTTTCTCTCTCACAGCCGCCCCATCTCCCGCCACTCAATTCTTCACCGCCTCCAAACACGCAGCCACCTCCTCCTCCTTCCACCGCCGTTCCAACAAACCATCCACCGCCGCCACAGCCAAGAAATTCAAGGCCTTCCAATTGGAGCAGTCTCAGTCCTCCCGTAAGGCCCAAATCAAGAAGGAGCGCTCCCTCAAGTCCCTCGCCAAGTCTCTCTCTGTATGGCTCAACTTTCTCCTCCAAAATCCTAATTCATGTGGCTGCCACTACTCCGCCGAGGATGCTTCCGCCGCCACTACCAATGGCAAGCGAGACGGCGCACCGGTAATCTCCGTAGTCGGCGTCGATTCCACCTGGCGCACTCCCAAGCGCCAGAGGAAGATGTGGTCCAGCAAGGAAAATGCTGCGACTGTAGCTGAGGTTCCTGATTCCTCGTTTTCGCGCCTCAGCGATTCTCTCAAGGATGTTTGCAGTTTCGAAGATTTGAATCAGCGGATGAGCTTGTATTTCAGCCTCGCAGCTTGTAAAGAGATCTTCCTACAAATGAATCGCGTCGCCAAGACAATTGACCAAGGAAGACTGAATATGAAGGCGCATTGCCCTATAGTAACTGATGTCGGCTTGAAGGATAAGGCCACTAGAATTCTCATGTGTTATAATTCTACTTGGTTGCGAATTGGATTGTATGTAATTTTTGGCGGTGACTCCTTGGTGTTAAATGGTGATGTGGATTCTGATCATGATGCTGTGTTCTTGAGAACGGTCGTTGACAAGCTATTTTTTTCGCATGAGGGTTTAGCTAAAGCCTATGCTTATAATAAAATGGTTGAAGGCGTGTATAGGTCAGGTTACTATGAGAATTTGGGGAATGTGATATTGAAAAGAATTTTGTTGCTTGTGCTTGTTCTGGATAAAGCTAAATGCCAGAGTTACCTCCCACTGGAGTATGGTATTGATGGATTGGATGGCGGTTCTCCTTTGTTATTCAAACCCGAATCCTGGATTAAATCAAGCAGTCAGCTGATTCATGAATTTCTATCGTCTGACGTAATGCATGGAGAAGGCAATCTTCTAACACATTTGGTGATTTTAGGTTACAAATTATCTCATCAACAGGAACCTCTTGTCGAGTATGATTTCATGATCAGAGATTTATTTGTAGATCTCCAAGATGGATTAAAACTGTGTAGAGCTATTCAGCTCTTGCAGCATAATTCTTCGATCCTCATGAAAATTGTAGTCCCCTCTGATACTCCTAAGAAAAAATTAGCAAACTGCAGTCTTGCCCTGCAATATATTAGGCAAGCTGGTGGGTCACTAGTTGATGAAGATGGCATGATGATTGTGGCAGATGATATTGCTAATGGAGACAAAGAACTTACAGTTTCCTTGCTCTGGAATATATTTGTTCATTTGCAGCTACCTCTTTTGGTTGATAAAGCAAGTTTAGAAGGGGAAATTTCTAAAATTCAAGGAGGCAAGGTTCCCGTAAACAATGCAAGTTCTAGCTCTATGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGACAACTATGATTGTGAAATTGACAATTTCCATTCCCTTATTGATGGCAAAGCTGTCTGGTGCTTACTTGATTATTACTTCCAGAAAGAACTTCAAAATTCTTGTTCGTTGAAGGAAGTTAGTATGAAAAGTGGCAAGGCATCAATTATGTCGGTTGATGAATATTCAGATGCACTGTATAATTTTATACTATCCCAAAAGTTGACTACATTACTGGGGAACTTCCCAGAGGTACTTCAAATTAGTGAGCTACTTCAATATAATGGTGCTTGCAGTGACCGAAGTGTGATAATTTTGTTGGTTTTCCTGGCAAGCCAATTATTTGTCAAGAAAAATTTGGATCACTTAAATTTCCACAAACTCTTGGGTTATGACTGCCAAAGTCCGAACCATAGACATTTAAGGATGCTAAGGTGCCTTTCAAATTCTGAATCAATTCAAAAGCCTGATGCTTCCGATGTGCTTGACAATGAAGATGCTTCAAGAAAATTCAAGGCCATCCAATCTTGGTGGCAAGACATGGCTGAAAGAAACGGTCTGAACAAACAAGCTGCCTCAAATTTGAAGGGATCAAAAATCACTGAATGCAGCACCAACATCAAAACAGAAAATGCTACAAGAACAATACAACTGCATCTCAGAGGATTGGTTGCACGGCGCAAGTTTCTGAAGATGGTAAATGCTATTACCCTTTTGCAAACAGTTTTCAGAGCTTGGCTAAAAGTGAGGCAAAAGTCAGCCTGTGTGATATTATCTACTGTTCAAGTCTGTGACTCTTCATGTGAAATACTGAAGCAATCAGAAACATATAAGAGATATGCCATGGTTTTCATTTATAGACGTTCCTTTTTGAGGTTAAAGAGCTCAGCACAGATTATCCAGAAAGCAGTTAGGAGTTGGCTCTATAGGAGGCATAAGCAAGAGTTTAGTACAAGTCCGGATCTTTTGATTTCAGATATGGTAGTGCCTGCTCTTAATGTTCAGAAATTGGTCCCTGATGGGATGGCACAATCTAGATATATTCATCAGCTAGATCACAGAGAGAAAGCTTTATTTGTTTCCCAACTGAAAGTCCCTTTCCATCTTCAAACAAATGCAGCCACTATCATTCAGCTTGCTTGGAAAAAGTTCATGTGCTGCAAGTCTGCTCAGAAGCAACACCTGTTTGCAACTAAAATTCAACGAAATTTCCGTAGGTGGTTATTGAGAAAAAGTTTTTTAGATAAGATTCAGGCTGTCGTAAAGATTCAATCTTATTTTCGAATGTGGAGATGTGTGAACGCTTTTCAGCTCTTCAAGATTGAATTTAAGGCAACTGTTATTCAATCATGTATGCGGGGCTGGTTAGCCCGAAAGAATGCTGGTGCACGTAGGAATCACCTATTTGCAACAAAAATTCAGCTAAATTTCCGCAGGTGGTTGTCGAGAAAAAGGTTTTTAAATCAGATTCAAGCTGTCATAAAAATTCAATCATATTTTCGGATGTGGAGATGTGTAAATGCTTTCCAGAAGTTCAAAATTGAGTTTAAAGCAGCTGTTATCATTCAGTCTTGTTTACGGGGCTGGTTTGCCCGACAAGATGCTTGTACGCGTAGGAAGGACATTGTTAAGATTCAAAGGCACTGCCGTGGTTGGCTTGTAAAGAGGAACTTCTTGTTCCAAAGAGACGCTGTAGTAAAGATCCAGTGTGTCGTTCGAAGTTTGAAGTGCCAAAAGGCTCTCAATTGCCAGAAAGATGCTGCTTTGGAGATCCAGCGCTTTATAAGGGGCCATGTAACTCGGAATCAGCTATTAGGCAGTGCTTCCAAGCTAGGCACAGTTATTCCTATTAGTTGCAGCTCAAGACCATTTGGCTTTTGTAGTTTTCAATTGGAATTGTTCTTGTTTTCGGTTGTGAAATTGCAACGATGGTGGAAGGGTCTTCTGTTGCTGAAGTTAATGAATAAATCGGCCATCATCATTCAGTCATGTACCCGTGGGAGGATAGCCAGGCGAAATGCTACTCTTTATAGAAGCCATGTTGTCATCCAAGAAGATGCCGCGTTGGTGATTCAACGCTACATTAGGGGACATTTAACTCGACATCGGGTATTAGGTGGTGCTTCTAACCTAAGTGCAATCACTCCTGTTGGCTGCATCTCAGGTCCAGTTGGCTGTCGTAGTTTTCCACCTGATCAATTTTTGCTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCACTTGTTACAGATATTGATGACAAAATCTGCTATTGTTATTCAATCTTGTACTCGTGGGTGGATCGCCAGGCGAACGGCTAATGTTCAGAGACATCGTATTATTGTCATCCAATCCCACTGGAAAGGTTACCGTGCACGTAAAGCTTCGAAAGAACAGTTATTGGATTTGCGCTTGAGAATGCAAAAGTCTGCCAGAAATGTAGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCGCTCTCGGAGCTACTCAATATGAAGAGTCTTAGTAACATCCTTCATACCTGTTCAATATTGGACATGGCTACAGGGCACTCTCAGAAATGTTGTGAAGAACTTGTGGCTGCCGGAGCTGTTGATACTTTGCTGCGGCTGATTCAAACAGTCAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCCGAAATCTCGCCCGCTATCCTCATCTTCTACAAGTGTTGATCCAAAGTCGTAATTCTGTACAGATAATTGTCATGGAATTGTTGAGGAATAAAAACGAGGGCTATTTCGTTGCTTCTGAGCTTCTGAAGAAGATATTTTCAACTGGCATAGGCGTTGAGGCGATTTTGAAGTCCCATGCTCTGCTAAAACGATTGCACGCCCTTGTCGAGGACCTTAAACGGAAGGGAATTTACGAGAAAAGAAATTCCAGGGCTCCTAACCTGGCTATCAAAGAAAACAGAGAGAGAAGATTGAAGGAGGCTGCTGAGATTGTGAAGCTGATAACAAGCGCGTGA 4641 0.4264 MDYEEPPSPSPSLRSSSLLKDISNFTTPRRPPFSLTAAPSPATQFFTASKHAATSSSFHRRSNKPSTAATAKKFKAFQLEQSQSSRKAQIKKERSLKSLAKSLSVWLNFLLQNPNSCGCHYSAEDASAATTNGKRDGAPVISVVGVDSTWRTPKRQRKMWSSKENAATVAEVPDSSFSRLSDSLKDVCSFEDLNQRMSLYFSLAACKEIFLQMNRVAKTIDQGRLNMKAHCPIVTDVGLKDKATRILMCYNSTWLRIGLYVIFGGDSLVLNGDVDSDHDAVFLRTVVDKLFFSHEGLAKAYAYNKMVEGVYRSGYYENLGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHEFLSSDVMHGEGNLLTHLVILGYKLSHQQEPLVEYDFMIRDLFVDLQDGLKLCRAIQLLQHNSSILMKIVVPSDTPKKKLANCSLALQYIRQAGGSLVDEDGMMIVADDIANGDKELTVSLLWNIFVHLQLPLLVDKASLEGEISKIQGGKVPVNNASSSSMELLLNWIQAVCDNYDCEIDNFHSLIDGKAVWCLLDYYFQKELQNSCSLKEVSMKSGKASIMSVDEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVIILLVFLASQLFVKKNLDHLNFHKLLGYDCQSPNHRHLRMLRCLSNSESIQKPDASDVLDNEDASRKFKAIQSWWQDMAERNGLNKQAASNLKGSKITECSTNIKTENATRTIQLHLRGLVARRKFLKMVNAITLLQTVFRAWLKVRQKSACVILSTVQVCDSSCEILKQSETYKRYAMVFIYRRSFLRLKSSAQIIQKAVRSWLYRRHKQEFSTSPDLLISDMVVPALNVQKLVPDGMAQSRYIHQLDHREKALFVSQLKVPFHLQTNAATIIQLAWKKFMCCKSAQKQHLFATKIQRNFRRWLLRKSFLDKIQAVVKIQSYFRMWRCVNAFQLFKIEFKATVIQSCMRGWLARKNAGARRNHLFATKIQLNFRRWLSRKRFLNQIQAVIKIQSYFRMWRCVNAFQKFKIEFKAAVIIQSCLRGWFARQDACTRRKDIVKIQRHCRGWLVKRNFLFQRDAVVKIQCVVRSLKCQKALNCQKDAALEIQRFIRGHVTRNQLLGSASKLGTVIPISCSSRPFGFCSFQLELFLFSVVKLQRWWKGLLLLKLMNKSAIIIQSCTRGRIARRNATLYRSHVVIQEDAALVIQRYIRGHLTRHRVLGGASNLSAITPVGCISGPVGCRSFPPDQFLLSVVKLQRWWKGHLLQILMTKSAIVIQSCTRGWIARRTANVQRHRIIVIQSHWKGYRARKASKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSILDMATGHSQKCCEELVAAGAVDTLLRLIQTVSRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRNSVQIIVMELLRNKNEGYFVASELLKKIFSTGIGVEAILKSHALLKRLHALVEDLKRKGIYEKRNSRAPNLAIKENRERRLKEAAEIVKLITSA 1546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1055 1084 IPR000048 GO:0005515
Viun3g06152 1546 Pfam Calponin homology (CH) domain 413 503 IPR001715 GO:0005515
Viun3g06152 1546 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1406 1439 IPR000225 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1317 1345 IPR000048 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1010 1035 IPR000048 GO:0005515
Viun3g06152 1546 ProSiteProfiles Calponin homology (CH) domain profile. 382 504 IPR001715 GO:0005515
Viun3g06152 1546 MobiDBLite consensus disorder prediction 1 39 - -
Viun3g06152 1546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1274 1339 IPR027417 -
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1078 1107 IPR000048 GO:0005515
Viun3g06152 1546 Gene3D - 956 1001 - -
Viun3g06152 1546 Gene3D - 530 655 IPR036872 -
Viun3g06152 1546 SMART iq_5 1293 1315 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 748 770 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1223 1245 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 955 977 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 932 954 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 909 931 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 771 794 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 832 854 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 980 1002 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1054 1076 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1005 1027 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1028 1050 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1077 1099 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1316 1338 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1123 1145 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1193 1215 IPR000048 GO:0005515
Viun3g06152 1546 SMART iq_5 1100 1122 IPR000048 GO:0005515
Viun3g06152 1546 PANTHER UNCHARACTERIZED 40 854 - -
Viun3g06152 1546 Gene3D - 397 505 IPR036872 -
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1224 1253 IPR000048 GO:0005515
Viun3g06152 1546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1108 IPR027417 -
Viun3g06152 1546 Gene3D - 1348 1545 IPR011989 -
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 933 962 IPR000048 GO:0005515
Viun3g06152 1546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 907 1000 IPR027417 -
Viun3g06152 1546 SMART arm_5 1395 1440 IPR000225 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1029 1058 IPR000048 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 981 1010 IPR000048 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1194 1221 IPR000048 GO:0005515
Viun3g06152 1546 SUPERFAMILY ARM repeat 1363 1506 IPR016024 -
Viun3g06152 1546 Gene3D - 1224 1294 - -
Viun3g06152 1546 Gene3D - 1103 1148 - -
Viun3g06152 1546 Gene3D - 1004 1055 - -
Viun3g06152 1546 Gene3D - 1295 1342 - -
Viun3g06152 1546 Gene3D - 1056 1102 - -
Viun3g06152 1546 Gene3D - 1176 1223 - -
Viun3g06152 1546 Gene3D - 908 955 - -
Viun3g06152 1546 Gene3D - 748 795 - -
Viun3g06152 1546 MobiDBLite consensus disorder prediction 9 39 - -
Viun3g06152 1546 CDD CH_ASPM_rpt1 388 499 - -
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1124 1153 IPR000048 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 749 777 IPR000048 GO:0005515
Viun3g06152 1546 Pfam Armadillo/beta-catenin-like repeat 1395 1440 IPR000225 GO:0005515
Viun3g06152 1546 ProSiteProfiles IQ motif profile. 1294 1321 IPR000048 GO:0005515
Viun3g06152 1546 SUPERFAMILY Calponin-homology domain, CH-domain 326 581 IPR036872 -
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 985 1000 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1295 1312 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 937 953 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1031 1049 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1057 1074 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1080 1098 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1319 1336 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1126 1144 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1277 1290 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1010 1026 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 958 976 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1226 1243 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 835 852 IPR000048 GO:0005515
Viun3g06152 1546 Pfam IQ calmodulin-binding motif 1196 1213 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06152 985 1130 Myosins gene family AT5G43900 32.667 6.16e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06152 K16743 - gmx:100817636 2521.89