Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06140 ATGGCTCCCAAGTTTCTAATCCTTTTGGCCGTGTTATCCATTTCAGCACTGTCACTGAGTCCTTCTCATGCACAAGACTCAGATAACAATGGCCTCGTCATGAACTTCTACAAGGAAGCATGTCCTCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCTTGGCTCAGAAACATCTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCACTGTTGCTGGACTCCACAAGAAGGAGCTTGTCTGAAAAGGAGACAGACAGAAGCTTTGGTTTGAGGAATTTCAGGTACATTGAGACAATCAAAGAAGCTGTGGAAAGGGAGTGCCCAGGAGTTGTTTCCTGTGCTGATATACTCGTTCTCTCTGCCAGAGATGGCATTGTTTCGCTAGGAGGACCCTATATCCCTCTTAAAACTGGGAGAAGGGATGGTAGAAGAAGCAGAGCTGATGTAGTTGAAACATTCCTCCCAGACCACAATGAATCCATTTCTTCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACTCCTGGAGTGGTTGCATTGCTTGGAGCACACAGTGTTGGTAGAACTCATTGTGTGAAGCTGGTGCATCGTTTGTACCCGGAGATTGATTCAGCACTGAACCCTGACCATGTCCCTCACATGCTGAAGAAGTGCCCTGATGCCATTCCAGACCCGAAGGCTGTGCAGTATGTGAGAAACGACCGTGGAACCCCCATGATTCTGGACAACAACTACTACAGAAACATATTGGACAACAAGGGGTTGCTGATAGTGGATCACCAACTGGCGAATGACAAGAGGACGAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAAGACTATTTCTTCAAGGAGTTTTCTAGAGCCATCACCTTGCTCTCTGAGAACAATCCTCTCACTGGCACAAAGGGAGAGATCAGAAAGCAGTGCAATGTTGCCAACAAGCACCATGAGGAGCCATGA 1005 0.4687 MAPKFLILLAVLSISALSLSPSHAQDSDNNGLVMNFYKEACPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRRSRADVVETFLPDHNESISSVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDSALNPDHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNVANKHHEEP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06140 334 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 Gene3D - 35 328 - -
Viun3g06140 334 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 Gene3D Peroxidase, domain 2 168 307 - -
Viun3g06140 334 FunFam Peroxidase 168 307 - -
Viun3g06140 334 Pfam Peroxidase 49 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 PANTHER - 15 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun3g06140 334 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Viun3g06140 334 FunFam Peroxidase 35 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06140 Viun-Chr3 64818313 64820212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06140 1 331 Peroxidase AT4G21960 79.154 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06140 K00430 - gmx:547513 613.994