Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06099 ATGGTCATCGAATTTATATTGGGGGGTTCTTTGATTCACAGCTTCCTTTGCTCTGTGTATGAAGTAACAATGGAGGTTGCTGTCCCAAGAAAAGAACGGTCAAAAGCATCGAAAACCGAGGATAAGCCGGAATTGTCCAGATGCTCTAAAGTTTACGGAAAATCGAAGAGAAAAGCTGGAGAAATCTCTGAGAATGGTGATAAGAAATCCGAACTGAAAGGGAAAGAAGGTAGGATGTGTTTAAAGAAGAATTTAAGGGTGACTAAAAAGAAGAGAGAGGTTCGAGAAAACTGCATGTTTGATAATATACAACCAAAGTTAGATGCGAAAGAAGATTCTTGTTCACCGAGGACAAGAAAACTACCATGCAAGAGAAGAGGTGAGAAACAAAAGCTTACTGTCTCAAACAAGAAAAGGAAATATGAAGATGATCTCTTGATTGATGATTTAGAAGATGAAGAAATGCTTGTTCTCTTAAGAGCAAAGACCAGGACCAGATCGAGAAGAATGAATGATGTGAAGGATGTTGAACAAAAGCCCCGAATTTGTCATCAATGCATGAAAAAGGAGAGAACACTTTTTGTGCCTTGTACTAAATGCCCGAAAATGTACTGTATGCAGTGTGTGGATAAATGGTACCCTGATATGACAATAGAAGAAATTGCTGCAAGTTGCCCGTTTTGCCAGAAAAACTGCAATTGCAATGTTTGCTTGCGCGCAAGAGGAATGATTAAGACATCTAACAGGGACATAAATGATTGTGAACAAGCTCAGTATCTGCATTATATGATCAACTTACTCCTACCATTTTTGAAACAAATCTGTCATGAACAAAGTCAAGAGGAGCAGATTGAAGCTAAAATACTAGGAAAACCTTCTTTTGAGAAGGAAATACCTCGAAGTCTTTGTGGCAACGATGAACGTGTCTATTGTGATCATTGTGCTACTTCAATTATTGATCTTCATAGAAGCTGCCCCAATTGTTCCTATGAACTCTGCCTCAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCTCGGGTGGAGCAGAAGTTCTCATATGTGAATAGGGGCTATGATTATATGCATGGTGGAGACCCTCTACCAGTGTCTAATGATATCAGGACATCAGAATGTCAAACCAAGCTATCTAATGTGTGGAATGCTAAGAGTGATGGAATCATCAGATGTGCACCAAAGGAGTTGGGGGGTTGTGGCAGTGCTGCATTGGAGCTGAAACGTGTCCTACCAAGTGGGTGGATATCTGAATTGGAAACCAAAGCTCGCAGTACGCTGAAAATTTGGGAAGATGAAAACACAACTCTTCAGCTAGAAAAACCAGTATCAAGCTACACCTCTTTGAGAAATGAAGCTGTTAAAGAAGACATAAGTGACAATAATATGCACTGTTCAGAGTCAAGTAGCATTCAGAAGGAAGGGTTGTTACTTTTCCAAAAGCATTGGGCTAATGGCGAACCAGTTATAGTTCGTGATGCCCTTAAACTGGGTACCGGTCTGAGTTGGAAGCCGATGGTAATGTGGCGAGCATTATGTGAAAATAGGGTTTCAGAGGTCAGTTCAAAGATGTCAGAAGTGAAAGCCATTGATTGCCTGGCTAATTGTGAGGTAGAAATCGATACTCACACATTTTTCAAAGGTTATATTGAGGGAAGAACATACAGAAATCTGTGGCCAGAGATGCTGAAGCTAAAAGACTGGCCCCCCTCTGATAAATTTGAAGATCTTTTGCCGCGCCACTGTGATGAGTTTATTCGCTCATTGCCATTCCAAGAGTACAGCGATCCTCGGAGCGGAATTCTCAATCTTGCTACGAAGTTGCCAACCCATGTCCTAAAACCTGACATGGGTCCGAAAACTTATATTGCCTATGGGATTAAAGAAGAGCTTGGTAGAGGCGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTCAATATTTTAACCCATACAGCAGAGGTGATGTTAACTGATGAGCAGCACTTAGTTATTTCAAAGTTGAAAGAAGCACACAAGGTACAAGATGAGAGAGAGCAGTGTGATGAAGAGAGGGTTACCGACAGCCTGAATTGCCGAACTTTCAAAGACAACAAAGTACAGATAGAAAACAAGGTAGTTTTAGAATCCAAAGACATAGAGAAGCGTCCTATTGAAATTAATGGAAAGTTCTTTCCAAATGATGTACATGAAGAGGTCGCTTCTGCTATAGAGAATGAATCAACGGAAACAGGCAGTGCTCTATGGGATATCTTTCGGAGAGAAGATTCTAAGAAGTTAGAAACATATCTCATAAAACACTCAAAAGAATTTAGACACACTTATTGTTCTCCAGTTGAACAGGTTGCACACCCAATTCATGACCAATGTTTTTATTTGACATGGGAGCACAAGAAGAAGCTGAAGGAGGAGTTTGGTGTAGAACCATGGACTTTTGAGCAGAAACTTGGGGAAGCTGTCTTTATTCCTGCTGGATGCCCACATCAAGTGAGGAATCTCAAGTCATGCACAAAAGTTGCGGTAGACTTCGTGTCTCCGGAAAATATCCATGAGTGTCTGCGTTTAACTAATGAGTTTCGCCAGCTTCCCAAGAACCACAAGGCCAGGGAAGATAAGCTTGAGATAAAGAAGATGATAGTTTATGCCATTGATGAAGCTGTCAGAGACCTAAAAGCTTTACTGAAGTTTTCATGA 2718 0.408 MVIEFILGGSLIHSFLCSVYEVTMEVAVPRKERSKASKTEDKPELSRCSKVYGKSKRKAGEISENGDKKSELKGKEGRMCLKKNLRVTKKKREVRENCMFDNIQPKLDAKEDSCSPRTRKLPCKRRGEKQKLTVSNKKRKYEDDLLIDDLEDEEMLVLLRAKTRTRSRRMNDVKDVEQKPRICHQCMKKERTLFVPCTKCPKMYCMQCVDKWYPDMTIEEIAASCPFCQKNCNCNVCLRARGMIKTSNRDINDCEQAQYLHYMINLLLPFLKQICHEQSQEEQIEAKILGKPSFEKEIPRSLCGNDERVYCDHCATSIIDLHRSCPNCSYELCLSCCQEIRDGSITPRVEQKFSYVNRGYDYMHGGDPLPVSNDIRTSECQTKLSNVWNAKSDGIIRCAPKELGGCGSAALELKRVLPSGWISELETKARSTLKIWEDENTTLQLEKPVSSYTSLRNEAVKEDISDNNMHCSESSSIQKEGLLLFQKHWANGEPVIVRDALKLGTGLSWKPMVMWRALCENRVSEVSSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRSGILNLATKLPTHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVMLTDEQHLVISKLKEAHKVQDEREQCDEERVTDSLNCRTFKDNKVQIENKVVLESKDIEKRPIEINGKFFPNDVHEEVASAIENESTETGSALWDIFRREDSKKLETYLIKHSKEFRHTYCSPVEQVAHPIHDQCFYLTWEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAIDEAVRDLKALLKFS 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06099 905 MobiDBLite consensus disorder prediction 110 134 - -
Viun3g06099 905 CDD cupin_RmlC-like 792 852 - -
Viun3g06099 905 Gene3D Cupin 464 877 - -
Viun3g06099 905 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 54 901 IPR045109 GO:0032454|GO:0033169
Viun3g06099 905 SUPERFAMILY Clavaminate synthase-like 484 899 - -
Viun3g06099 905 Pfam JmjC domain, hydroxylase 748 851 IPR003347 -
Viun3g06099 905 ProSiteProfiles Zinc finger RING-type profile. 183 229 IPR001841 -
Viun3g06099 905 SMART cupin_9 584 868 IPR003347 -
Viun3g06099 905 ProSiteProfiles JmjC domain profile. 603 868 IPR003347 -
Viun3g06099 905 MobiDBLite consensus disorder prediction 52 73 - -
Viun3g06099 905 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 179 248 IPR018866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06099 Viun-Chr3 64629969 64635157 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Viun3g06099 JmjC 8.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06099 K15601 K21989 gmx:100797860 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g06099 3 64629969 64635157 Viun3g06099 3 64629969 64635157 ECH
Viun3g06099 3 64629969 64635157 Viun6g02253 6 28171827 28175657 PCT