Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06094 ATGGGGAAAGTGATTGTTGTTTCCATAGGTTTACCATTGATAGGAGCGATTCTGATATCGATGTTCATGGCTGCTATAACTTGCTTCACAGAAGAACAGCGTTCAATATATTTGGTCTTAATGGAAGGAGATGATGCACTTGCTTTTACCAAACATTCATCAACAATGCACTCCAACAGCGAAGCTTCAAAGGCACATGAAAAGCACATAATATCATCTCACGATGTATTTCTGCAAACAACCTTGGATACAGGAAGCTACAACAAACTCCACAGTTACAAACACATCATCAATGGTTTTTCTGTCCACACAACCCCTTCCCAGGCTGAAAGACTAAGAAGTAACCCAGGAGTTAAATTGGTAGAGAAAGACAGAGGAGTGAAAAAGATGACAACATACACACCTGAGTTTCTAAGTTTACCACAGGGAATATGGGCGCAGGAAGGAGGAGAAACAAATGCAGGTGAAGGAGTTGTGATTGGTTTTGTGGATAGTGGCATCAACCCTTTTCATCCCAGCTTTGCTTACGATCCCAAGCTACCTTTCAAATCAAACCTCTCTCGTTTTGAGGGTGCATGCATGACGGGTCCTCTCTTCCCTCACACTTCTTGCAATGGAAAGATAGTAGCCGCCAGGTACTTCTCTGCTGGGGCTGAAGCTGCTGCTACCCTCGATCCTTCCAAGGATTTTCTTTCACCCTATGATGCAGATGGACATGGCAGTCATGTCGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTGGTCAACAGTTTTTGCTACGGGAAAGCTAGTGGAATAGCACCACGTGCAAGGATTGCTGTTTATAAGGCTATTTATCCCACCGTGGGAACTATAGCAGATGTTATTGCTGCGATCGATCACGCTGTTCTGGATGGAGTGGATATCTTATCGCTATCTGTGGGACCAAAGGGACCACAAGAAGGCACGTTAACATTCTTAAACATGTTTGAACTTTCTTTGTTGTTTGCACGAAAAGCAGGAGTTCTGGTGGTGCAAGCTGCAGGGAACTACGGTCCCGCATCTTCAAGTGTAGTGTCATTCAGTCCCTGGAGTGTCACTGTCGCCGCTAGCACCACAAACAGAAGGTACCCTTCTTCACTTCTACTTGGAAATGGCGCGGTACTTAGTGGCGCGGGACTATCAGGACCAAGTTTTGGAAATGGATCAGTTTGGCATAAGCTTGTTTTAGCTAAGGATGCGTACAAAATGAGTGGAACAGATCCAAAGACTGAGGATTACATAAAGGAGTGTCAACATCCAGAAGTTTTGGACCCTCGTGTAGTGTTGGGAAGCATCATTATCTGCACCTTCTCAGGTGGGTTCTATAATGGCACCTCAACTCTTGCTGCTGTTATTGGCACCGTGAAGGCTCTGGGAATGGAGGGCTTTGTTTTAGTTGCGAACCCAAGCTATGGTGATTATATTGCAGAGCCAATGCCTTTTGCTTTTTCTGGTATTTTGATCCCTCGTGCGAAGGATGCCAAGGCTATATTAGAGTACTATGAAGAAGAAACAAAGAGGAACCAGAAAGGAAATGCAATAGAATTTGGTGCTTTAGCAGCAGTGGGAGAAGGAAGACTTGCCTCTTTCACAGGGAGATCGCCAGTAGTCAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGATATCAAAAAACATGTTGCAGATGTACTTAAACCTGATATTCTTGCTCCAGGGCACCAAATTTGGGCAGCCTGGAGCCCCCTCAGTACCTCAGAACCTCTACTCAAAGGGAACAGTTTTGCATTATTATCTGGTACCAGCATGTCCACACCTCATGTGGCTGGAATAGCAGCACTGATGAAGCAACACAATCCATCATGGACTCCATCCATGATAGCATCTGCGATCTCTACAACAAGCTCAAAGCATGATCATCTTGGACAGCCTATAATGGCAGAAGGCTATGGGATCAACACCTTGCTAACCGCCACTCCTTTTGATTACGGTTCAGGCTTTGTCAACCCCAATCGTGCCGTTGATCCCGGTTTGGTACTTTCATCAAATTATGCAGACTTCATCAGCTTCTTGTGCTCTTTGCCGGACATAGACACCAATGTGGTCGTTGCAGCTACTGGAGAGCAATGCAATCACCCATTTGCCAACCCTTTCGGTCTAAACCTTCCTTCAGTTACAGTGTCTGAACTGAGAGGATCGGTTTCTGTCCGAAGAACTTTCATGAATGTTGGTGAATCCACAGAGACGTACTTGGCCTCTGTTATTCCTCCAAATGGAACTGAAATTTGCCTCTATCCAACTTGGTTTACCTTAACTCCACAAGGAACGCAAGATTTGGATATACAAATCACTGTTGTCCAACCAATGCGGAATTTTACCTTTGGTGAAATTGTTCTCGCAGGGAATTTAAACCACATTGTACGAATAACGTTGTCAGTGTTGGCGGTTTCGGTGTACTGA 2466 0.4485 MGKVIVVSIGLPLIGAILISMFMAAITCFTEEQRSIYLVLMEGDDALAFTKHSSTMHSNSEASKAHEKHIISSHDVFLQTTLDTGSYNKLHSYKHIINGFSVHTTPSQAERLRSNPGVKLVEKDRGVKKMTTYTPEFLSLPQGIWAQEGGETNAGEGVVIGFVDSGINPFHPSFAYDPKLPFKSNLSRFEGACMTGPLFPHTSCNGKIVAARYFSAGAEAAATLDPSKDFLSPYDADGHGSHVASIAAGNAGVPVVVNSFCYGKASGIAPRARIAVYKAIYPTVGTIADVIAAIDHAVLDGVDILSLSVGPKGPQEGTLTFLNMFELSLLFARKAGVLVVQAAGNYGPASSSVVSFSPWSVTVAASTTNRRYPSSLLLGNGAVLSGAGLSGPSFGNGSVWHKLVLAKDAYKMSGTDPKTEDYIKECQHPEVLDPRVVLGSIIICTFSGGFYNGTSTLAAVIGTVKALGMEGFVLVANPSYGDYIAEPMPFAFSGILIPRAKDAKAILEYYEEETKRNQKGNAIEFGALAAVGEGRLASFTGRSPVVSRFSSRGPDIIDIKKHVADVLKPDILAPGHQIWAAWSPLSTSEPLLKGNSFALLSGTSMSTPHVAGIAALMKQHNPSWTPSMIASAISTTSSKHDHLGQPIMAEGYGINTLLTATPFDYGSGFVNPNRAVDPGLVLSSNYADFISFLCSLPDIDTNVVVAATGEQCNHPFANPFGLNLPSVTVSELRGSVSVRRTFMNVGESTETYLASVIPPNGTEICLYPTWFTLTPQGTQDLDIQITVVQPMRNFTFGEIVLAGNLNHIVRITLSVLAVSVY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06094 821 Gene3D - 693 818 - -
Viun3g06094 821 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Viun3g06094 821 SUPERFAMILY Subtilisin-like 130 680 IPR036852 GO:0004252|GO:0006508
Viun3g06094 821 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 129 IPR037045 -
Viun3g06094 821 ProSitePatterns Serine proteases, subtilase family, serine active site. 602 612 IPR023828 -
Viun3g06094 821 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 79 813 IPR045051 -
Viun3g06094 821 Pfam Subtilase family 155 651 IPR000209 GO:0006508|GO:0008236
Viun3g06094 821 Gene3D Peptidase S8/S53 domain 157 689 IPR036852 GO:0004252|GO:0006508
Viun3g06094 821 Pfam Fibronectin type-III domain 722 815 IPR041469 -
Viun3g06094 821 CDD Peptidases_S8_3 127 638 IPR034197 -
Viun3g06094 821 Gene3D - 369 539 - -
Viun3g06094 821 SUPERFAMILY Protease propeptides/inhibitors 87 127 - -
Viun3g06094 821 ProSitePatterns Serine proteases, subtilase family, histidine active site. 239 249 IPR022398 -
Viun3g06094 821 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Viun3g06094 821 PRINTS Subtilisin serine protease family (S8) signature 601 617 IPR015500 -
Viun3g06094 821 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Viun3g06094 821 ProSiteProfiles Serine proteases, subtilase domain profile. 135 676 - -
Viun3g06094 821 Pfam Peptidase inhibitor I9 55 128 IPR010259 -
Viun3g06094 821 CDD PA_subtilisin_like 375 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06094 Viun-Chr3 64597208 64602741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06094 36 818 Subtilisin-like Serine Gene Family AT1G62340 57.975 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06094 - - gmx:100798915 1238.4