Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06087 ATGAAGTTCGACAACTCCAACGGCCAGCCGACCCTAGCCGCCCACCTTCCGCCGCCGCAGGAGGACAGCACCGACGCCGAAGCCGATGAGATATTCGTCCCGCCCCTCAACTTCGCCATGGTCGACAACGGCATTTTTCGGTCCGGCTTTCCCAATTCTGCTAATTTCGGTTTCCTGAAATCGCTCCGTCTTCGTTCCGTAATATGTTTGTGTCCTGAACCGTATCCAGAAACGACGTCGGAATTTTTGAAGGACAACGGAATAAGGCTTTATCAGTTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAAATAATACAATTCGGGAAGCTTTGAAAGTAGCCCTCGATGTTAAAAACCATCCCCTTTTGATTCATTGTAAACGAGGAAAGCACCGCACTGGTTGCCTTGTGGGATGCATAAGAAGATTGCAGAGATGGTGTCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCAAGGGTGTCAGACCAGAGGTTCATCGAATTATTTGATATATCCTGTTTGAAGCACCACCAACTCCCATTTTCATGCTCAAGGAAATAG 585 0.4803 MKFDNSNGQPTLAAHLPPPQEDSTDAEADEIFVPPLNFAMVDNGIFRSGFPNSANFGFLKSLRLRSVICLCPEPYPETTSEFLKDNGIRLYQFGIDGCKEPFVNIPNNTIREALKVALDVKNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKHHQLPFSCSRK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06087 194 PANTHER TYROSINE-PROTEIN PHOSPHATASE 30 187 - -
Viun3g06087 194 ProSiteProfiles Dual specificity protein phosphatase domain profile. 37 189 IPR020422 GO:0006470|GO:0008138
Viun3g06087 194 Pfam Tyrosine phosphatase family 33 187 IPR004861 -
Viun3g06087 194 FunFam probable tyrosine-protein phosphatase At1g05000 31 181 - -
Viun3g06087 194 Gene3D Protein tyrosine phosphatase superfamily 31 181 IPR029021 -
Viun3g06087 194 PRINTS Plant and fungal dual specificity phosphatase signature 32 49 IPR020428 GO:0016791
Viun3g06087 194 PRINTS Plant and fungal dual specificity phosphatase signature 69 82 IPR020428 GO:0016791
Viun3g06087 194 PRINTS Plant and fungal dual specificity phosphatase signature 105 119 IPR020428 GO:0016791
Viun3g06087 194 PRINTS Plant and fungal dual specificity phosphatase signature 88 102 IPR020428 GO:0016791
Viun3g06087 194 MobiDBLite consensus disorder prediction 1 25 - -
Viun3g06087 194 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 32 179 IPR029021 -
Viun3g06087 194 CDD PFA-DSP_Siw14 32 178 - -
Viun3g06087 194 ProSitePatterns Tyrosine specific protein phosphatases active site. 127 137 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06087 Viun-Chr3 64524349 64527140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06087 14 194 Protein tyrosine phosphatase (PTP) family AT4G03960 69.231 3.13e-95 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06087 K18045 - gmx:100785520 356.295