Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06048 ATGGAATTCCAACCTTCTTTGATGATGGTTATTGCCTCATTCCTCTTGTTACTATTTTGGCTGGCAAGAATTTACAAGCAGAAAATCAAAGCAGAAAAGCTTCCCCCAGGTCCATGGAAGCTTCCTCTAATAGGGAACCTTCATCAACTGGCAGTGGCAGGAACACTTCCACACCATACCCTTCAGAATCTATCAAACAAATATGGACCTTTGATGCACCTTCAACTGGGTCAAATTTCTGCTGTGATCGTGTCATCCCCTGACATGGCAAAGGAGATAATGAAGACAAATGATCTTAATTTTGTGCAGAGACCAGCACTACTTGCTCCTAAAATCCTGGCCTATGGTTCAGCCGATATTGCCTTTTCTCCATACGGTGATTACTGGAGGCATATGAGGAAAATATGCACACTGGAGCTTCTTAGTGCCAAAAGGGTTCAGTCTTTCTCCTTCATTCGCGAAGACGAGGTGAATAAACTCATAGAATCCATTGGAGCGTGTGCATGCAGAGGTTCACAAGTCAATGTTTCTAAAAGCGTTTCATCTTTGGTGAGTAGCATTGTGATGAGAACAGCGTTTGGTAAAAAATGTGAGTACGAAGAGCGACTTTTGTGTTTGCTGAAGGAAGGAGCGGAACTGGCAGGAGGGTTTGATGTTGCTGATTTGTTCCCTTCAATGAAACCTCTCCATCTTATAACTGGGCTGAAAGCTAAGTTGGAGAAAATGCATGAAGAGCTGGACAAGATTCTGGACAACATTATCAGCGAGCATAGATCAAAACATCGAGAAGGAGATGCAGAAGAGAATCTGGTTGATGTTCTTTTGCGTATACAACAAAGTGCCACCCTCGACATCCCTGTAACAATGGACAACATCAAAGCCATCATATGGGCCGACATATTCGGAGCTGGGACTGATACCTCATCTGTTGTATTGGAGTGGAGTATGTCAGAGTTGTTGAAAAACCCAAGAGTGATGAAAAAAGCACAGACCGAAATAAGAGAAGCTTTGAATGGGAAGAAGAGAGTTAGTGAGAGTGAGGTGCAGGAAGTGAGGTACTTGAAGTGGGTGATCAAAGAAACACTGAGATTACATCCACCTGGTCCCTTGCTGCCAAGAGAATGCAGGGAAGCATGCATGATAGGTGGATATGAAATTCCTGTGAAGACGAAAGTAATTGTGAATGCATGGGCCATCGGAAGAGATCCAAAGCACTGGTATGATGCAGAGAAGTTTATACCAGAGAGGTTTGATGGCACTGATTTTGATTTTAAAGGGAATAATTTTGAATACATTCCTTTTGGAGGTGGAAGAAGAATGTGTCCAGGCATTTTACTTGGATTGGCTAATGTTCAACTTCCTCTGGCTGCATTGCTCTATCACTTTGATTGGGAACTCCCCAATGGGATAAAACCAGAGAAGCTTGATATGACTGAAAGCTTTGGAGCTTCAGTGGGAAGAAAAAACAACCTGTATTTGCTACCGACTCCATATCAATATTCCCTTCATCACCGTCTCATTGTCGATTCACCCTCTTGA 1539 0.4295 MEFQPSLMMVIASFLLLLFWLARIYKQKIKAEKLPPGPWKLPLIGNLHQLAVAGTLPHHTLQNLSNKYGPLMHLQLGQISAVIVSSPDMAKEIMKTNDLNFVQRPALLAPKILAYGSADIAFSPYGDYWRHMRKICTLELLSAKRVQSFSFIREDEVNKLIESIGACACRGSQVNVSKSVSSLVSSIVMRTAFGKKCEYEERLLCLLKEGAELAGGFDVADLFPSMKPLHLITGLKAKLEKMHEELDKILDNIISEHRSKHREGDAEENLVDVLLRIQQSATLDIPVTMDNIKAIIWADIFGAGTDTSSVVLEWSMSELLKNPRVMKKAQTEIREALNGKKRVSESEVQEVRYLKWVIKETLRLHPPGPLLPRECREACMIGGYEIPVKTKVIVNAWAIGRDPKHWYDAEKFIPERFDGTDFDFKGNNFEYIPFGGGRRMCPGILLGLANVQLPLAALLYHFDWELPNGIKPEKLDMTESFGASVGRKNNLYLLPTPYQYSLHHRLIVDSPS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06048 512 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 Coils Coil 232 256 - -
Viun3g06048 512 FunFam Cytochrome P450 71D8 27 495 - -
Viun3g06048 512 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 CDD CYP71-like 67 491 - -
Viun3g06048 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Viun3g06048 512 Pfam Cytochrome P450 35 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 SUPERFAMILY Cytochrome P450 35 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 Gene3D Cytochrome P450 21 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06048 512 PANTHER OS08G0105600 PROTEIN 59 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06048 Viun-Chr3 64287867 64291204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06048 25 498 Cytochrome P450 AT3G26300 45.021 1.57e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06048 - K23806 gmx:100794503 789.26