Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06047 ATGGTTATCTTCCCATTCCTGTTGTTGCTGCTCTGGTTTGCAAGGGTTTATTACAAGAACAAAATCACAGTGAAGAGTGTGGTTCATAAGCTTCCCCCAGGTCCATGGAAGTTGCCTGTAATAGGCAACCTTCACCAACTGGCAAGCGCAGACACACTCCCACACCATACCCTTCAAAATCTATCAAACAAATATGGACCTTTGATGCACCTTCAACTGGGTCAAATTTCTGCTGTGATCGTGTCATCCCCTGACATGGCAAAGGAGATAATGAAGACACACGATCTTAATTTTGTGCAGAGGCCACAACTACTTTGTCCTAAAATCCTTGCCTATGGTTCAACCGATATTGCCTTTGCTCCATACGGTGAGTACTGGAGACAGATGAGGAAAATATGTACACTGGAGCTTCTCAGTGCCAAAAGGGTTCACTCTTTCTCCTTCCTTCGTCAACAAGAGGTGGCCAACCTCATACAATCCATTCAATCGTCTGCATCTTCAGCTTCACAAGTTAATGTTTCTGAGACTGTTTTCTCTTTTCTCAGCACCCTTGTTTCAAGAACAGCCTTTGGTAAAAAATCTGAGAAGGAGGATGAGCTTTTGTGTTTGCTCAAGAAAGGAGCGGAACTCACGGGAGGGTTTGACCTTGCTGATTTGTTCCCTTCGTTTAAAGCTCTTCATTTCATAACTGGGATGAAAGCTAAGCTGGAAGACATGCACAAAGAGCTCGACAAGATTTTAGAAAACATCATCAACGAACATCAGTCAAAGCATAGCATCGGAGATGCAGAAGAAGAGAATCTGGTTGATGTTCTTTTGCGCGTGCAACAAAGTGCCACCCTGGAGGTTCCAGTCACAATAAACAACATCAAAGCCGTTATATGGGACATATTTGGGGCAGGGACTGATACTTCAGCAACAGTACTGGAGTGGGCTATGTCAGAGCTGATGAAGAATCCAAGAGTGATGAAAAAGGCACAGGTTGAAATAAGAGAAGCTTTAAGGGGAAAGAAAAGAATCGGTGAGAGTGATGTAAATGAACTAAACTACTTGAAGTTGGTGATTAAAGAAACCTTAAGGTTACATCCTCCTGTTCCTCTGTTGCTCCCAAGAGAGTGCAGGGATCCATGCAATATAGGTGGATATGCAATACCTATGAAGACTAAAGTGATAGTAAATGCATGGGCACTTGGAAGAGATCCAAAGCATTGGTATGATGCAGAGAAGTTTATACCAGAGAGGTTTGATGGCACTGGTTTTGATTTTAAAGGGAATAATTTTGAGTACATTCCTTTTGGGGCTGGGAGGAGAATTTGTCCTGGCATTTTACTTGGCCTAGCTAATGTTGAGCTTCCTCTTGCTGCATTGCTCTATCACTTTGATTGGAAACTACCCAATGAGATGAAAACACAGGACTTAGACATGACAGAAGCGTTTGGAGCTACAGTGGGAAGAAAAAACAACCTCTGTCTGATACCAACTATGTATAACTTTTCCCTTAATCATGTTATTGCCACATGA 1521 0.4254 MVIFPFLLLLLWFARVYYKNKITVKSVVHKLPPGPWKLPVIGNLHQLASADTLPHHTLQNLSNKYGPLMHLQLGQISAVIVSSPDMAKEIMKTHDLNFVQRPQLLCPKILAYGSTDIAFAPYGEYWRQMRKICTLELLSAKRVHSFSFLRQQEVANLIQSIQSSASSASQVNVSETVFSFLSTLVSRTAFGKKSEKEDELLCLLKKGAELTGGFDLADLFPSFKALHFITGMKAKLEDMHKELDKILENIINEHQSKHSIGDAEEENLVDVLLRVQQSATLEVPVTINNIKAVIWDIFGAGTDTSATVLEWAMSELMKNPRVMKKAQVEIREALRGKKRIGESDVNELNYLKLVIKETLRLHPPVPLLLPRECRDPCNIGGYAIPMKTKVIVNAWALGRDPKHWYDAEKFIPERFDGTGFDFKGNNFEYIPFGAGRRICPGILLGLANVELPLAALLYHFDWKLPNEMKTQDLDMTEAFGATVGRKNNLCLIPTMYNFSLNHVIAT 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06047 506 FunFam Cytochrome P450 71D8 24 493 - -
Viun3g06047 506 CDD CYP71-like 64 489 - -
Viun3g06047 506 PANTHER OS08G0105600 PROTEIN 56 497 - -
Viun3g06047 506 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 Gene3D Cytochrome P450 19 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 Pfam Cytochrome P450 32 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 Coils Coil 229 253 - -
Viun3g06047 506 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun3g06047 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Viun3g06047 506 SUPERFAMILY Cytochrome P450 32 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06047 Viun-Chr3 64285698 64287560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06047 29 496 Cytochrome P450 AT3G26300 44.632 3.70e-146 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06047 - K15472 gmx:100794503 809.675