Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06033 ATGCATGTCCCCAGTTATTCCTCGGTGGAGACAACTTCAGGGTATGAAGATATGTTCAGTGAACCGGGAATTCCAACTATGATTACTTGGAGTTATGGTGGAAAGGAAGTAGCTGTGGAGGGATCGTGGGATAATTGGAAAGCAAGAATGCCCCTGCAGAGATCAGGGAAAGACTTTGCAATAATGAAGGTATTGCCATCTGGGGTTTACCAGTTCAGATTTATTGTGGATGGACTGAAGAGGTATACTCCAGACTCGCCTTGGGCCCGTGATGATGCCGGGAATGCTTACAACATCTTGGACTTACAGGATTATGTTCCTGAAGATATTGGAAGCATTTCTAGTTTTGAGCCTCCTCAATCACCAGAGTCGAGCTATGATAACTTACAGCTTAGTTCTGAAGATTATGCTAAGGAGCCACCGTTGGTTCCTCCACTCTTGCAAATGACACTGCTAAATGTGGCTGAAACAAATATGGAAATCCAACCTCCTTTGTCAAGACCTCAACATGGAGTGCTGAATCATCTTTACACGCAGAAAGGAAAGAGCAGTCCTACAGTTGTTGGTCTTGGTACAACTCATCGGTTTCTAGCCAAATATGTCACTGTGGTGCTGTACAAGTCCTTGTAA 630 0.4429 MHVPSYSSVETTSGYEDMFSEPGIPTMITWSYGGKEVAVEGSWDNWKARMPLQRSGKDFAIMKVLPSGVYQFRFIVDGLKRYTPDSPWARDDAGNAYNILDLQDYVPEDIGSISSFEPPQSPESSYDNLQLSSEDYAKEPPLVPPLLQMTLLNVAETNMEIQPPLSRPQHGVLNHLYTQKGKSSPTVVGLGTTHRFLAKYVTVVLYKSL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06033 209 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 137 207 IPR006828 GO:0005515
Viun3g06033 209 SUPERFAMILY AMPKBI-like 106 208 IPR037256 -
Viun3g06033 209 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 209 IPR043554 -
Viun3g06033 209 Pfam Glycogen recognition site of AMP-activated protein kinase 24 103 IPR032640 -
Viun3g06033 209 CDD E_set_AMPKbeta_like_N 25 101 - -
Viun3g06033 209 SMART AMPKBI_2 119 209 IPR006828 GO:0005515
Viun3g06033 209 Gene3D - 112 209 - -
Viun3g06033 209 Gene3D Immunoglobulins 19 106 IPR013783 -
Viun3g06033 209 SUPERFAMILY E set domains 23 109 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06033 Viun-Chr3 64204568 64207818 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06033 K07199 - gmx:100805688 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g06033 3 64204568 64207818 Viun6g02174 6 27603475 27607029 PCT