Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06011 ATGGAGATGGAGTACCCAGAAAACTACTGCTACAGAAGCAGCAGCAGCGTGTGTGAGATAGAGGAGGAAGAGGACCACAAACCCACTCTTCAGAAGAAAGAAGAAGAAGACAAAGAAGAACAAGACTGTGTTTACGTTGCAGTGGGTAAGAGCAACACAAGCATGCACGCTCTCTCATGGACACTTAACAACATGGTTACTCAATCTACCACCATTTATCTCATTCATGTGTTTCCTCAGATCAAACACATTCCAAATCCACTGGGAATAGGAATGGTTCCAAGGAATGAAGTGAGTGTTGAGCAGGTGGAGAGTTATGTTGAGCAAGAAAGAAGCAAAAGGAGAGAGCTCCTTCAGAAGTTCCTACAATCATGCTCTTCTTCCAAGGTTAAGGTAGACACCATCCTGATTGAAAGTGACACAGTTGCAAAGCCTATCCTCGACCTCATTCCGATTCTTCAGATAAAAACTCTAGTCATTGGAGCCAACAAATTCCATCTAAGAAAATCAAAATCAAGGAAAGGGAATAACAGTGTTGCTGATGAGATACTGCGGAATTCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGGAAGGAAGTAAATGAGCAGATGATGATTTCACCCCCTAACCATACTTCCATGACTACCCAAAACAAAGAAGATAATCATGATTCAGTTTCATGCATTTGTTTCATACCCAAGTTCAAATGA 717 0.4142 MEMEYPENYCYRSSSSVCEIEEEEDHKPTLQKKEEEDKEEQDCVYVAVGKSNTSMHALSWTLNNMVTQSTTIYLIHVFPQIKHIPNPLGIGMVPRNEVSVEQVESYVEQERSKRRELLQKFLQSCSSSKVKVDTILIESDTVAKPILDLIPILQIKTLVIGANKFHLRKSKSRKGNNSVADEILRNSPESCKVRIICEGKEVNEQMMISPPNHTSMTTQNKEDNHDSVSCICFIPKFK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06011 238 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 9 237 - -
Viun3g06011 238 Coils Coil 100 120 - -
Viun3g06011 238 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 188 - -
Viun3g06011 238 Gene3D HUPs 23 209 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06011 Viun-Chr3 64122115 64123298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06011 47 200 Plant U-box Gene Family AT5G57035 28.571 1.92e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06011 - - vra:106768035 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g06011 3 64122115 64123298 Viun6g02140 6 27378847 27380596 PCT