Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05988 ATGAATTTTCAGGGCTTGACTCCAATCTTGGCCAAAGATTTCTCGAGCTCAGCTTTGTTTTCGCTCCATTTCTCGAACTATTGCACTCCGCAGTTGGTGTCGAGGTCCCGTATAAGCCCTCTCCAGTCTTACATAGTGTACTTGGGATCACATGGGCATGGTGAAGGAGCCACGGATGCTGATTTTGATAGAGTTACACAAGCTCATCATGAGTTCCTTCAACCTTACGTTGGAAGCTTTGAGAAAGCAAAAGAGGCAATGATATACTCTTACACAAGGCACATCAATGGTTTTGCCGCCATGCTGGAAGAGGAAGAAGCGGCTGACATTGCAGAACATCCCGAGGTTGTGTCAGTTTTCTTAAACAAATTAAGAAAACTGCACACTACTCATTCATGGGAATTCATGGACATGAAAAGGGGCAATGTAGTTCCCCCCGATTCAGTGTTCAGAAAAGCCAGATATGGTGAAGACAGTATTATTGCGCATCTTGACACTGGTGTATGGCCAGAATCTCCAAGCTTTAGTGATGAGGGGATGGGACCCATACCATCACGGTGGAAAGGAATTTGCCAGCATGATATGACTGGATTCCGTTGCAACAGGAAGCTTATAGGGGCAAGGTACTTCAACAAAGGTTATCTCTCGTTTTTAGAAGAAGCAGGAGAAACAAAATTTAACAAGTCACAGAACACAGTACGGGACTATGAGGGTCATGGATCTCACACACTGTCAACAATGGGAGGAACCTTTGTTCCTGGGGCGAGCGTGTTTGGGTTTGGAAATGGAACTGCCCAAGGTGGCTCTCCTAAGGCCCGGGTTGTTTCTTACAAGGTTTGCTGGCCGGAATTTGATGGCGGTCAGTGCGCCGATGCCGATATCATGGCAGGCTTAGACATGGCCATACATGATGGGGTTGATGTTCTTTCCCTCTCTCTCGGAACGGGTCCTATGGATTACTTTGAAGATGGTTTAGCAATCGGGGCCTTTCATGCTACCATGAAGAACATTCCTGTCGTATGTTCTGGTGGAAATTCCGGACCATATCCTAAAACTGTCTCTAATATTGCACCTTGGATACTAACAGTTGCTGCAAGCACCTTGGACAGAGAGTTTCGCTCTGTTGTTCGTCTCCACAATGGACAACGCTTCAAGGGAGCAAGTCTTGCTAAAGCCATGCCGGAAGACAAGCTTTATCCACTCATCAACGCTGCAGATGCAAAATGCGGCAATGAATCAGTTGAAAACGCTACTCTGTGTCTGAGCGGAACAATTGACCCTGAAAAGGCAAGGGGCAAAATATTGGTTTGCCTTAGAGGTAAGAGTGCAAGAATGGATAAGAGTGCGGTTGCTTTGAACGCTGGTGCAGCCGGGATGATTCTTTGTAATGACGAGTCTACTGGCAATGGCATTACTGCTGATCCTCATATGCTTCCTGCATCACAACTTACTTATAAAGATGGTCTTGCTATCTATGCCTATATCAATTCAACTGAGACTCCGTTAGGATATATTGAACCACCCATGACCGAGTTGGGGATAAAGCCTTCTCCAGTCATGGCAGGTTTCTCCTCAAGAGGGCCTAACACAGTCACGTCAGAGATTCTTAAGCCTGATATCACCGCTCCCGGTGTAGACATTATCGCTGCCTACTCAGGAGCTGTTAGCCCGACCGATTTCGATTATGATAAACGCAGGGTTCCTTTTATCACCATGTCTGGAACATCCATGTCTTGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAGGACTCTTTATCCTACTTGGAGTTCAGCAGCCATTAAATCTGCAATAATGACAACTGCTAGGACAAAGGACAATACTGGTAAGCCAATTCTTGATGTGGATGGTGAGAACGCAGATTCATTTGCCTATGGGTCTGGCCACATCAGACCAAATCGTGCCATGGATCCCGGGTTGGTGTATGACTTAAGCATGAATGATTACCTAAACTTTCTTTGTGTCACTGGCTATAACCAGACTCAGATAACGACATTCTCTGGTGCACATTATCGTTGCCCTGAAATAATAAAAGTCCTGGATTTCAACTACCCTTCAATTACAATACCAAAACTTTATGCCACAGCTACTTTGACACGGAGGTTGAAAAATGTGGGTTCACCGGGCACTTACACAGCAAGGCTAAAGGTACCAGAAAGTCTTTCCATCTCTGTGGAGCCTCGTGTGTTGAAATTTGACAAAATTGGTGAAGAGAAGAGCTACAAGATAACAGTGAAAGTAACACTACCGGGTGAGGCTACAGCATTTGGAGGCATAACTTGGTCAGATGGGAAACATCATGTCAGGAGTCCAATTGTAGTTGGTGGAGTTAAAGGCTAG 2361 0.4566 MNFQGLTPILAKDFSSSALFSLHFSNYCTPQLVSRSRISPLQSYIVYLGSHGHGEGATDADFDRVTQAHHEFLQPYVGSFEKAKEAMIYSYTRHINGFAAMLEEEEAADIAEHPEVVSVFLNKLRKLHTTHSWEFMDMKRGNVVPPDSVFRKARYGEDSIIAHLDTGVWPESPSFSDEGMGPIPSRWKGICQHDMTGFRCNRKLIGARYFNKGYLSFLEEAGETKFNKSQNTVRDYEGHGSHTLSTMGGTFVPGASVFGFGNGTAQGGSPKARVVSYKVCWPEFDGGQCADADIMAGLDMAIHDGVDVLSLSLGTGPMDYFEDGLAIGAFHATMKNIPVVCSGGNSGPYPKTVSNIAPWILTVAASTLDREFRSVVRLHNGQRFKGASLAKAMPEDKLYPLINAADAKCGNESVENATLCLSGTIDPEKARGKILVCLRGKSARMDKSAVALNAGAAGMILCNDESTGNGITADPHMLPASQLTYKDGLAIYAYINSTETPLGYIEPPMTELGIKPSPVMAGFSSRGPNTVTSEILKPDITAPGVDIIAAYSGAVSPTDFDYDKRRVPFITMSGTSMSCPHVAGVVGLLRTLYPTWSSAAIKSAIMTTARTKDNTGKPILDVDGENADSFAYGSGHIRPNRAMDPGLVYDLSMNDYLNFLCVTGYNQTQITTFSGAHYRCPEIIKVLDFNYPSITIPKLYATATLTRRLKNVGSPGTYTARLKVPESLSISVEPRVLKFDKIGEEKSYKITVKVTLPGEATAFGGITWSDGKHHVRSPIVVGGVKG 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05988 786 SUPERFAMILY Subtilisin-like 127 647 IPR036852 GO:0004252|GO:0006508
Viun3g05988 786 Pfam Peptidase inhibitor I9 43 128 IPR010259 -
Viun3g05988 786 Gene3D - 660 783 - -
Viun3g05988 786 SUPERFAMILY PA domain 429 493 IPR046450 -
Viun3g05988 786 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Viun3g05988 786 PRINTS Subtilisin serine protease family (S8) signature 573 589 IPR015500 -
Viun3g05988 786 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Viun3g05988 786 Pfam PA domain 417 491 IPR003137 -
Viun3g05988 786 FunFam Subtilisin-like protease SBT1.5 158 389 - -
Viun3g05988 786 Gene3D Peptidase S8/S53 domain 159 656 IPR036852 GO:0004252|GO:0006508
Viun3g05988 786 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 781 IPR045051 -
Viun3g05988 786 CDD Peptidases_S8_3 126 609 IPR034197 -
Viun3g05988 786 ProSiteProfiles Serine proteases, subtilase domain profile. 132 643 - -
Viun3g05988 786 Pfam Subtilase family 156 634 IPR000209 GO:0006508|GO:0008236
Viun3g05988 786 CDD PA_subtilisin_like 375 505 - -
Viun3g05988 786 FunFam Subtilisin-like protease SBT1.5 660 783 - -
Viun3g05988 786 Pfam Fibronectin type-III domain 688 781 IPR041469 -
Viun3g05988 786 Gene3D - 369 512 - -
Viun3g05988 786 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 128 IPR037045 -
Viun3g05988 786 FunFam subtilisin-like protease SBT1.5 369 512 - -
Viun3g05988 786 ProSitePatterns Serine proteases, subtilase family, serine active site. 574 584 IPR023828 -
Viun3g05988 786 FunFam Subtilisin-like protease SBT5.3 34 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05988 Viun-Chr3 64048322 64056424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05988 42 781 Subtilisin-like Serine Gene Family AT5G59810 59.164 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05988 - - gmx:100808488 1195.65