Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05960 ATGATGCTATGGCTATTTCTTTGTACAGTGATTAAAAGTAATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTAGAGACTTTTGTCGGGTCACTGTCTGCTGGTGTTGGAGTTGGTTTTGTATCTGCATTACTATTCAAATATTCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCGTATTTCTCGTACATGCTTGCTGAAGGTCTTGGACTGTCTGGTATCGTATCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATATTCGAATTTGTCACGTAGTTCTCAAAGATTCGTCTCTGCATTTTTTGAGTTGATATCATCATTAGCTGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGAAACATAGTTGGTCGCATGTTGGATTTATATTCTCTTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTGTTCTCATGTGCTTATTTGGTCAACTTGGTTAGACCTGCCTATCGACAGATTCCGCGAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCTTTTGCCCTTGCTCTGCAATCAATTCATGATCTGCCAAATGGACATGGACAGATCATCTTGACTGCAACTACTGCAATAGTTGTTTTGACGGTATTACTGATTGGTGGTTCAACAGGCACCATGCTGGAAGCTTTACAAGTTGTAGGTAGTGACAGTCCTATCATCCAGAGTCCTTTGGCTTCAGTTACCAGATCGACTTTTGGGGGAACCAATGGTTATCTTTCTCCTGAAGATGAAGAATCATCATCAGGGAACAAAATCAAGATGAGGCTACAAGAATTTCAAAGAAGTGCTGCATCTTTTACAGCATTAGATAAAAACTACCTCACCCCATTCTTCACTAGTCAAAATGAAGATGAAGCTATGCCCCTGACTTCGGAGAACATGGGATTGGATGATGATGACCGTGAAAACTACTCGTCATGA 1020 0.401 MMLWLFLCTVIKSNPSGQNFFMVVVRFLETFVGSLSAGVGVGFVSALLFKYSGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSAFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFSSIIFIGIARAANVFSCAYLVNLVRPAYRQIPRKHQKALWYSGLRGAMAFALALQSIHDLPNGHGQIILTATTAIVVLTVLLIGGSTGTMLEALQVVGSDSPIIQSPLASVTRSTFGGTNGYLSPEDEESSSGNKIKMRLQEFQRSAASFTALDKNYLTPFFTSQNEDEAMPLTSENMGLDDDDRENYSS 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05960 339 PANTHER SODIUM/HYDROGEN EXCHANGER 17 319 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Viun3g05960 339 MobiDBLite consensus disorder prediction 313 339 - -
Viun3g05960 339 Pfam Sodium/hydrogen exchanger family 8 241 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun3g05960 Viun-Chr3 63983280 63991215 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05960 27 243 Antiporters AT3G05030 34.188 5.21e-26 106
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05960 K14724 - gmx:100810105 540.036