Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05954 ATGAAGTTGGAAGAATGGGCAAAACACTACTCTGGTCGGTGTCTGAAGTTGGAAGCATCAGCAATGGCAAGCGCAAGTGTTGCTAAAGAAGAAGATAACAAACTCACGCTCTATTCGTATTGGAGGAGCTCTTGTTCCTTCCGAGTCCGAATCGCTCTCAACCTCAAAGGCCTTAAATACGACTACAAGCCCGTCAATCTGTTGAAGGGAGAACAATTTAGCCCCGAGTTTCTGCAGCTCAACCCTGTTGGTTGGGTTCCCGTTCTAGTGGACGGCCACGCTGTTCTTTATGATTCTCTCGCCATTATTTTGTATTTGGAAGATAAGTATCCTCACAATCCTCTGCTCCCTCGTGATATTCCTAAGAGAACAATCAATTTCCAGGTTACTAGTGTTGTTTCCTCAACAATACAACCTCTTCAGAACTTGAGTTTACTGAACTACATCGGGGAGAAAGTTGGCCCTGATGAAAAACTTCGTTGGGCCCAAAGTGTAATTAGAAGAGGCTTTACAGCACTTGAAAAGCTATTGAAAGACCACGCAGGAAGATATGCAACCGGAGATGAGGTTTTCCTGGCAGACGTATTTTTAGCACCTCAGTTACATACAGCATTTAAAAGATTCGACATCCCAATGAACGAGTTCCCTGTTTTGTCAAGATTGCATGAGACATATAGTGAGATCCCCGCATTCCAGGAGGCTCTACCAGAGAACCAGCCAGATGCAGTACACTAA 735 0.4449 MKLEEWAKHYSGRCLKLEASAMASASVAKEEDNKLTLYSYWRSSCSFRVRIALNLKGLKYDYKPVNLLKGEQFSPEFLQLNPVGWVPVLVDGHAVLYDSLAIILYLEDKYPHNPLLPRDIPKRTINFQVTSVVSSTIQPLQNLSLLNYIGEKVGPDEKLRWAQSVIRRGFTALEKLLKDHAGRYATGDEVFLADVFLAPQLHTAFKRFDIPMNEFPVLSRLHETYSEIPAFQEALPENQPDAVH 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05954 244 NCBIfam maleylacetoacetate isomerase 36 242 IPR005955 GO:0003824|GO:0005737|GO:0009072
Viun3g05954 244 Gene3D Glutaredoxin 37 113 - -
Viun3g05954 244 SFLD Main (cytGST) 35 224 - -
Viun3g05954 244 PANTHER MALEYLACETOACETATE ISOMERASE 35 242 - -
Viun3g05954 244 FunFam Maleylacetoacetate isomerase 118 244 - -
Viun3g05954 244 SUPERFAMILY GST C-terminal domain-like 114 242 IPR036282 -
Viun3g05954 244 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 119 244 IPR010987 -
Viun3g05954 244 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 33 114 IPR004045 -
Viun3g05954 244 Pfam Glutathione S-transferase, N-terminal domain 37 114 IPR004045 -
Viun3g05954 244 SFLD Glutathione Transferase (cytosolic) 35 224 IPR040079 -
Viun3g05954 244 SUPERFAMILY Thioredoxin-like 30 118 IPR036249 -
Viun3g05954 244 FunFam Glutathione S-transferase Z1 33 117 - -
Viun3g05954 244 Pfam Glutathione S-transferase, C-terminal domain 158 233 IPR004046 -
Viun3g05954 244 CDD GST_N_Zeta 35 107 IPR034333 -
Viun3g05954 244 Gene3D - 116 244 - -
Viun3g05954 244 CDD GST_C_Zeta 122 239 IPR034330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05954 Viun-Chr3 63964462 63969825 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05954 34 242 Glutathione S-transferase Gene Family AT2G02380 61.244 1.56e-94 275