Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05864 ATGTCATCTGTAGATGTAGACTTCTTTACAGAATATGGCGAAGGGAGTAGATACAGAATAGAGGAAGTGATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCTTATGATACACGCACAGGAGAGAAGGTTGCAATAAAGAAAATCAACGACATATTTGAACACGTTTCTGATGCCACCCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATCAAGCATATTTTATTACCTCCTTCTAGTAGGGAATTCAAAGATATATATGTTGTATTTGAGCTTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTGCAGAGCATTATCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTGAAGCCAAAAAATATTTTAGCAAATTCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACACCAACTGCTATATTTTGGACAGATTATGTTGCTACACGGTGGTATAGGGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTAACTGGGAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCCTCTCCTGAAGCCATTGCTAGGGTACGGAATGAGAAAGCTCGAAGATACTTGAGTAGTATGCGCAAGAAAAAGCCGGTGCCTTTCTCTCAAAAGTTTCCCAATGTAGATCCCCTTGCTCTTCGGGTTTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCAGATCCATATTTTAAAGGCCTGGCCAAAGTTGAGAGAGAGCCTTGTTCTCAGCCAGTTACCAAGATGGAGTTTGAATTTGAGAGACGTAGGATAACAAAGGAAGACGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTAAAAGAACATTTAGACGGAGAAGAGCCAACAGGATTCATGTATCCAAGTGCCGTGGACCATTTCAAAAAACAATTTGCATATCTTGAGGAGCAATATGGAAAAGGTGGAACTGTTACTCCACCTGAGAGGCAACATGCATCATTACCCAGGCCATGTGTGTTGTATTCAGATAACGAAAAGCAAAATATGGCAGTGGTTGCGGATGATCTCTCCAAGTGTAGGATCAGAGAAGTTGAGAAGCCAGCCATAGACAAGAACGGTGGTATCCCAATGACCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCACGTCCAGGAAAAGTTGTAGGTTCAGTACTGCGTCACAACAACAGAGGGGTGGCAGTGACAACTGAGACTGAGCAGCGGAAGACGGGTAAAAACCCATCTGTTTCAGCCAAGTATGCTGCTCAAAGCTGTTCTTATCCAAGAAGAAACCCAAACTGTAAAATTGAGAGGGCAGTTGAAGGAATTGAAGGTGCTAATGGACTTCAGACAAAGCCTCAATATCTAGCACGCAAAGTTGCTGCTGCACAAGGGGGACCTGGTGGTAATTGGTATTGA 1665 0.4252 MSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSSREFKDIYVVFELMESDLHQVIKANDDLTAEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANSDCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNVDPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPCSQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEHLDGEEPTGFMYPSAVDHFKKQFAYLEEQYGKGGTVTPPERQHASLPRPCVLYSDNEKQNMAVVADDLSKCRIREVEKPAIDKNGGIPMTRLPLQAPQNIQGVAARPGKVVGSVLRHNNRGVAVTTETEQRKTGKNPSVSAKYAAQSCSYPRRNPNCKIERAVEGIEGANGLQTKPQYLARKVAAAQGGPGGNWY 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05864 554 Gene3D Phosphorylase Kinase; domain 1 33 354 - -
Viun3g05864 554 ProSiteProfiles Protein kinase domain profile. 18 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05864 554 CDD STKc_TDY_MAPK 17 354 - -
Viun3g05864 554 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 353 - -
Viun3g05864 554 FunFam Mitogen-activated protein kinase 8 111 - -
Viun3g05864 554 Pfam Protein kinase domain 18 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05864 554 SUPERFAMILY Protein kinase-like (PK-like) 15 313 IPR011009 -
Viun3g05864 554 FunFam Mitogen-activated protein kinase 104 332 - -
Viun3g05864 554 SMART serkin_6 18 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05864 554 ProSitePatterns MAP kinase signature. 53 156 IPR003527 GO:0004707|GO:0005524|GO:0006468
Viun3g05864 554 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Viun3g05864 554 Gene3D Transferase(Phosphotransferase) domain 1 104 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05864 Viun-Chr3 63544856 63550350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05864 2 554 MAP Kinase Gene Family AT5G19010 78.269 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Viun3g05864 Pkinase 3.5e-67 CL0016