Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05863 ATGCCTCATGATCAGAGAAAAAAGTCATCTGTAGATGTAGACTTCTTTACAGAATATGGCGAAGGGAGTAGATACAGAATAGAGGAAGTGATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCTTATGATACACGCACAGGAGAGAAGGTTGCAATAAAGAAAATCAACGACATATTTGAACACGTTTCTGATGCCACCCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACGCCATCCTGATATTGTGGAGATCAAGCATATTTTATTACCTCCTTCTAGTAGGGAATTCAAAGATATATATGTTGTATTTGAGCTTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTGCAGAGCATTATCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTGAAGCCAAAAAATATTTTAGCAAATTCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACACCAACTGCTATATTTTGGACAGATTATGTTGCTACACGGTGGTATAGGGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTAACTGGGAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCCTCTCCTGAAGCCATTGCTAGGGTACGGAATGAGAAAGCTCGAAGATACTTGAGTAGTATGCGCAAGAAAAAGCCGGTGCCTTTCTCTCAAAAGTTTCCCAATGTAGATCCCCTTGCTCTTCGGGTTTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCAGATCCATATTTTAAAGGCCTGGCCAAAGTTGAGAGAGAGCCTTGTTCTCAGCCAGTTACCAAGATGGAGTTTGAATTTGAGAGACGTAGGATAACAAAGGAAGACGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTAAAAGAACATTTAGACGGAGAAGAGCCAACAGGATTCATGTATCCAAGTGCCGTGGACCATTTCAAAAAACAATTTGCATATCTTGAGGAGCAATATGGAAAAGGTGGAACTGTTACTCCACCTGAGAGGCAACATGCATCATTACCCAGGCCATGTGTGTTGTATTCAGATAACGAAAAGCAAAATATGGCAGTGGTTGCGGATGATCTCTCCAAGTGTAGGATCAGAGAAGTTGAGAAGCCAGCCATAGACAAGAACGGTGGTATCCCAATGACCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCACGTCCAGGAAAAGTTGTAGGTTCAGTACTGCGTCACAACAACAGAGGGGTGGCAGTGACAACTGAGACTGAGCAGCGGAAGACGGGTAAAAACCCATCTGTTTCAGCCAAGTATGCTGCTCAAAGCTGTTCTTATCCAAGAAGAAACCCAAACTGTAAAATTGAGAGGGCAGTTGAAGGAATTGAAGGTGCTAATGGACTTCAGACAAAGCCTCAATATCTAGCACGCAAAGTTGCTGCTGCACAAGGGGGACCTGGTGGTAATTGGTATTGA 1686 0.4247 MPHDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSSREFKDIYVVFELMESDLHQVIKANDDLTAEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANSDCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLSSMRKKKPVPFSQKFPNVDPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPCSQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEHLDGEEPTGFMYPSAVDHFKKQFAYLEEQYGKGGTVTPPERQHASLPRPCVLYSDNEKQNMAVVADDLSKCRIREVEKPAIDKNGGIPMTRLPLQAPQNIQGVAARPGKVVGSVLRHNNRGVAVTTETEQRKTGKNPSVSAKYAAQSCSYPRRNPNCKIERAVEGIEGANGLQTKPQYLARKVAAAQGGPGGNWY 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05863 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05863 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05863 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 360 - -
Viun3g05863 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05863 561 FunFam Mitogen-activated protein kinase 111 339 - -
Viun3g05863 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Viun3g05863 561 CDD STKc_TDY_MAPK 24 361 - -
Viun3g05863 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Viun3g05863 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Viun3g05863 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Viun3g05863 561 FunFam Mitogen-activated protein kinase 15 118 - -
Viun3g05863 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05863 Viun-Chr3 63544856 63551142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05863 1 561 MAP Kinase Gene Family AT5G19010 78.049 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Viun3g05863 Pkinase 3.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05863 - - gmx:100799442 1035.4