Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05812 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGATATTGCTGAAAAGAAGATGGAAAACAGGGATTTTGCGGGGGCTCGTAAAATTGCTCTTAAGGCTCAGCAGCTGTACCCCGATCTGGAAAATATTGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTGTGCTGAGAAGAAATTGTATGGTAGTGAAATAGATTGGTATGAAATTCTTCAGGTTGAACAGACAGCTGTTGATGCACTAATTAAGAAGCAATATAGAAAGTTCGCCCTCCAACTCCATCCTGACAAAAACAAGTTTGCTGGTGCTGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTACTTCTGGACCGTGAAAAACGTAATGTTTTTGACATGAAGCGTAGAGTTCCGATGAACAAACCTGCTACATCACATTATAATACTACTGCGTGGAGGAATGCTAAGTCCAACTTTACAAGCTCAACTTCTCAGCAGCAGCAGCAGCAAAATGGTGCACGAGCTACATTTTGGACAGTCTGCCCATTTTGTTCTGTTAAGTATCAATATTACAAAGAAATTTTAGATAAATCTCTTCGCTGCCAACATTGTAAAAGGCCCTTTGTTGCATATGAAGTGGGAAAACGAGGTACACCATCTCCAGCAACTAATTCAACTCAGCAAGCTTCTGACCCGCAGAAAGGTGGTTTGAATCATGGTGCTTTCAAAGTAGGTGCTGAATCTCAAAGCAATTCACATGCTGAGAAGTCCAATATAAGGTCATCCCCGGCAACTAATTCAACCCAACAGAGAGGCGGTTTGAATCATGGTGCTTTTAAGGTAGGTGTTGGATCTCAAAGCAATTCACATGCTGAGAAGTCCAATATAGGGTCATCTGTTAAAATGGCACCTGCTAGTGTTTCTCGAAAGAGAAAAAGGAAGCAGGTGGCAGAATCCAGTGAAAGTTCTGATCCTTTGATCCACAGTGATTCTGAAGAAGATAGAGTTGCTGGAAAGGATGGTTATTCCAGTGTAGAAAACAATTCAACTACTAGAGAAGGGCATCTACGGAGATCTACCCGGAAAAGGCATCAGGTCTCCTACAAGGAGCATTTGAACAACATTGATGATGGTTTCTCTGAAAGATGCGGTGATGGTGACGGTCATGGTGAGAAAAGTAAAATGAATGACCATAATGGTTTAGCTGCTGCGCACAAAGAAGTAAATCAGAAACAGCATGCTGCTGCTCACAAAGAAGTAAATCAGAAACAGCATGCTACTGCTCCCAAAGAAGTAAATGCTGCTGCTCACAAAGAAGTAAATCAGAAAAAGCACCTGTATTCGGGAAGAAATGAGGAAACTAACACATTTAAGGGAAAAGATAAAGGAAAAGATGTGGTGGGAGGGGCAAAGCAGGTGGATGAAACCTCAGAGCATCCTCCAGGTTCAACCTCCAAAGTATCAAATCAACCAAATGTTTATGCCTTCCCTGATGCAGAGTTCAGTGATTTTGAGAAGGACAAGAGAAAAGAATGTTTTGCTGCTGGGCAGATTTGGGCTGTTTATGACACAGCAGAAGGTATGCCTAGGTTCTATGCTTTAATCAGGAAAGTTCTATCTCCTGGATTCAAACTGCAGTTAACATGGTTCGAACCACATCCGGGCTGGAAGGATGAAATCAACTGGGTGAACGAGGAATTGCCTGTTTCTTGTGGGAAATATAAACTTGGCGACACTGACGTCACGGAAGATCATCTGATGTTTTCTCATCTGGTTTTGTGTGAAAAAATTAGCCGTACTTCTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATTAATTGGTACATAGATGCGAAATCTCACCAGCCGTATGAATATGAGTTTGTTGAAATCTTGACAGATTATGTTGAAGATGAGGGTGTATATGTTGTTTTCTTGACTAAGTTGAAAGGTTTTGTAAGTATCTTCCTTCAAAATATAAAGGAATCTAAAAGTTCATTTCAAATTCCACCACTGGAGTTATTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACCGGTGTGGAAAGGGCTGGTGTACCCTCAGGATCTTATGAACTTGATCCCGGAGCTTTACCAGAACATTTTGCAGAGATGGTTGGTCATGGCTCATCTGTCTGTGAGAATACAGGCACTTCGGATAGATCAGAATCCCTGATGTCTGAGGGAGGTAGGTCCACTCCCGATGTTAATGGCAACACTGATTGTTGTGCTCCTCTGGCACCAGAAACAATTGAAATTCCAGATACCCATTTCTTTAATTTTGACGCTGGGAGATCCCTTGAGAAGTTTCAGATTGGTCAAATTTGGGCATTTTACAGTGACGAGGATGGATTGCCTAAATATTACGGTCGTATTAATAAGATTGTGACTAGTCCTGATCTTGAATTGCACGTTTCCTGGCTTACTTGCTACCGGCTACCAGAGAATGCCACTGAATGGGAGGACAAAGATATGGGTGTGCTTATTTCATGCGGTCGATATAAAGTTAAGAAAACAGATGAGTTTCTCAGTATTTTTAGTACCACCTCTTCCGTTTCACATCAAGTGCATGCTGAATCTGTTGGAAAGAGTACAAGATATGCGATCTTTCCGAGGAAAGGTGAAGTTTGGGCGTTATATAGAAAATGGACAAATAAAATGAAGTCTTCTGAGTTGAAAAATTGGGAGTATGACATAGTGGAAGTCATCGAAGAAACTGGTTTGTTCATTAATGTTTTAGTTCTGGAGTTTGTTAGTGGGTTTAGTTCCGTTTTCAAGGGCAAATCAAATGAAGGATCATCTGTCAAGCTGAGAATACCAAGAAAAGAGTTGCTTAGGTTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCCATCTGAGAGATTTCTGGGAACTTGATCCCGGTGCGCTACCAACACATTATTATGGCTCTAGATGA 2985 0.4141 MDCNKEEALRAKDIAEKKMENRDFAGARKIALKAQQLYPDLENIAQMLVVCDVHCCAEKKLYGSEIDWYEILQVEQTAVDALIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRNVFDMKRRVPMNKPATSHYNTTAWRNAKSNFTSSTSQQQQQQNGARATFWTVCPFCSVKYQYYKEILDKSLRCQHCKRPFVAYEVGKRGTPSPATNSTQQASDPQKGGLNHGAFKVGAESQSNSHAEKSNIRSSPATNSTQQRGGLNHGAFKVGVGSQSNSHAEKSNIGSSVKMAPASVSRKRKRKQVAESSESSDPLIHSDSEEDRVAGKDGYSSVENNSTTREGHLRRSTRKRHQVSYKEHLNNIDDGFSERCGDGDGHGEKSKMNDHNGLAAAHKEVNQKQHAAAHKEVNQKQHATAPKEVNAAAHKEVNQKKHLYSGRNEETNTFKGKDKGKDVVGGAKQVDETSEHPPGSTSKVSNQPNVYAFPDAEFSDFEKDKRKECFAAGQIWAVYDTAEGMPRFYALIRKVLSPGFKLQLTWFEPHPGWKDEINWVNEELPVSCGKYKLGDTDVTEDHLMFSHLVLCEKISRTSFKVYPRKGETWALFKNWDINWYIDAKSHQPYEYEFVEILTDYVEDEGVYVVFLTKLKGFVSIFLQNIKESKSSFQIPPLELFRFSHRVPSFKMTGVERAGVPSGSYELDPGALPEHFAEMVGHGSSVCENTGTSDRSESLMSEGGRSTPDVNGNTDCCAPLAPETIEIPDTHFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGRINKIVTSPDLELHVSWLTCYRLPENATEWEDKDMGVLISCGRYKVKKTDEFLSIFSTTSSVSHQVHAESVGKSTRYAIFPRKGEVWALYRKWTNKMKSSELKNWEYDIVEVIEETGLFINVLVLEFVSGFSSVFKGKSNEGSSVKLRIPRKELLRFSHQIPAFKLTEEHGHLRDFWELDPGALPTHYYGSR 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05812 994 PRINTS DnaJ domain signature 103 123 IPR001623 -
Viun3g05812 994 PRINTS DnaJ domain signature 69 87 IPR001623 -
Viun3g05812 994 PRINTS DnaJ domain signature 87 102 IPR001623 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 214 230 - -
Viun3g05812 994 MobiDBLite consensus disorder prediction 240 270 - -
Viun3g05812 994 Pfam Domain of unknown function (DUF3444) 760 971 IPR024593 -
Viun3g05812 994 Pfam Domain of unknown function (DUF3444) 488 693 IPR024593 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 726 750 - -
Viun3g05812 994 Pfam DnaJ domain 67 128 IPR001623 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 406 421 - -
Viun3g05812 994 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 277 298 - -
Viun3g05812 994 MobiDBLite consensus disorder prediction 432 468 - -
Viun3g05812 994 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 987 - -
Viun3g05812 994 CDD DnaJ 67 120 IPR001623 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 406 487 - -
Viun3g05812 994 MobiDBLite consensus disorder prediction 473 487 - -
Viun3g05812 994 Gene3D DnaJ domain 64 173 IPR036869 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 374 393 - -
Viun3g05812 994 SMART dnaj_3 66 123 IPR001623 -
Viun3g05812 994 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Viun3g05812 994 MobiDBLite consensus disorder prediction 307 336 - -
Viun3g05812 994 MobiDBLite consensus disorder prediction 210 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05812 Viun-Chr3 63243855 63248213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05812 4 209 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.545 2.51e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05812 - - vun:114177826 2014.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05812 3 63243855 63248213 Viun6g02447 6 29466940 29472265 PCT