Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05806 ATGTCTTCTTCCATGGCTGTTGGAGCAATGTTCCATAAACTCACCTCTGATCATGCTTCTGTTGTCTCCATGAACATTTTTGTTGCCCTTCTCTCTGCTTGCATCATCATCGGTCATCTCTTGGAGGAGAATCGATGGATCAATGAATCCATCACTGCCCTTCTCATTGGTCTTTGTACTGGGGTCTTTATACTGCTTTCTACCGGAGGAAAAAGCTCTCATATACTAGTATTCAGTGAAGATCTTTTCTTCATTTACCTTCTCCCACCCATCATTTTCAATGCCGGGTTCCAGGTGAAGAAGAAACAGTTTTTCCGCAACTTTATGACTATTATGCTCTTTGGTGCAGTTGGTACTTTGATATCATTCTGCATCATATCACTGGGTGCCATACATTTTTTTCAGAAGTTGGACATTGGTTCCCTCAAGATTGGAGATTTTCTTGCAATTGGAGCAATATTTTCAGCAACAGATTCAGTTTGCACGTTGCAGGTTCTTAATCAGGATGAGACTCCTTTGCTATATAGCCTGGTCTTTGGGGAGGGAGTAGTAAATGATGCCACCTCTGTAGTGCTCTTCAAAGCAATTCAAAATTTTGACCTCTCTCACATTGACTCAAACACTGCCTTACAGTTAATAGGAAATTTTTTATATCTGTTCATTGCAAGCACTGTGTTGGGAATCTTTGCTGGATTGCTTAGTGCTTACATAATCAAAAAACTCTATTTTGGCAAGCTAATAAGGCATTCTACAGACCGTGAGGTTGCTCTCATGGTACTCATGGCGTACCTTTCATATATGCTGGCTGAACTATTTTCTTTGAGTGCCATTCTGACTGTTTTCTTCTGCGGAATTGTGATGTCTCACTACACGTGGCATAATGTAACTGAAAGTTCAAGGGTGACAACAAAGCATGTATTTGCAACTTTGTCATTCATTGCTGAAATCTTCATCTTCCTCTATGTGGGGATGGATGCATTAGATATAGAAAAGTGGCGAATCGTAAGTGAAAGCCCGAGAAAATCTATCGGGGTGAGTTCGTTGCTGTTGGCACTTATTCTGGTGGGAAGAGCTGCATTTGTTTTCCCTCTGTCCTTCTTATCCAACTTGCTTAAGAAGTCTCAATCTGAGAAAATTGAGTTAAAGCAACAAGTAACAATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTTTCTATCGCACTTGCTTACAATCAGTTTACTCGATTGGGCCATACTAAATTGCGTGAGAATGCCTTCATGATCACTAGTACCATCAGTGTTGTACTCTTCAGCACACTGGCATTTGGGTTGATGACAAAGCCACTTGTAAGGGTATTGCTTCCTTCGTCAAAGCATGTGATGAGCTTCTCGTCCCCACCATCGACACCAAAATCATTCACAGTGCCACTTCTTGGCAGTGGAAGAGAGGATTCATCGTGGACCGATGGTGGAACCCCAAATGGGGCTCCTCCAACAACCACCTTTAGGATGCTGCTAAGCTCCATTCCTACTCGTGGGGTGCACCACTATTGGCGCAAGTTTGATGATTCTGTCATGCGACCCGTGTTTGGTGGACGAGGTTTTGTGCCCTATGTTCCCGGGTCACCCCTTGAACAAAGTGTTCATCAGTGGCATGCCAGTTAG 1644 0.4319 MSSSMAVGAMFHKLTSDHASVVSMNIFVALLSACIIIGHLLEENRWINESITALLIGLCTGVFILLSTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLKIGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDSNTALQLIGNFLYLFIASTVLGIFAGLLSAYIIKKLYFGKLIRHSTDREVALMVLMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSESPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKSQSEKIELKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAFMITSTISVVLFSTLAFGLMTKPLVRVLLPSSKHVMSFSSPPSTPKSFTVPLLGSGREDSSWTDGGTPNGAPPTTTFRMLLSSIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQSVHQWHAS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05806 547 PANTHER SODIUM/HYDROGEN EXCHANGER 15 523 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Viun3g05806 547 Pfam Sodium/hydrogen exchanger family 29 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun3g05806 547 Gene3D - 143 195 - -
Viun3g05806 547 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun3g05806 547 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun3g05806 547 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun3g05806 547 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Viun3g05806 547 Coils Coil 364 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05806 Viun-Chr3 63187917 63191590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05806 15 543 Antiporters AT3G05030 74.060 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05806 - - ccaj:109808409 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05806 3 63187917 63191590 Viun3g05806 3 63187917 63191590 ECH