Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05792 ATGCTGTCTCCCTTGCATCACCAAAATCTTGTGACACTGATTGGTTACTGTTGCGAACCTGATCATTGGCTACTTGTTTACGAGTATATGCCATTGGGGTCCTTGGAGAATCATTTATTCGATCTTCATCCTAGCAGGGAACCCCTTGACTGGAACACAAGGATGAAGATAGCAAGTGGTGTGGCAAAGGGATTAGAGTATTTGCATATTTTGGGAGACCGTCCTGCGATATTTGGAGACTTCAAATCATCGAACATCCTCCTGGGCGAGGGTTATCATCCCAAGTTGTCTGATATTAGGATGGCAAATTTTGGTCGCCTTTGTAATAGCAGTGATGCTTCAACATCTGTGGGAACATATGGTTACTGTGCTCCAGAATATGTGGTCACCGGCCACCTAACTCCGGAATGTAATGTCTACGCTTTCGGAATGGTCCTTCTGGAGCTCATTTCGGGGGTCAAGGCCATTGATAAGAGTCGTTCCCCTGAACCCTACCATAAGTGGGCACAACCTATTTTCAAGGACAGCAGTGAGTTGTATAGATTGGTGGACCCTCTACTTGACGGGTCTTATCCAGTGGCATGGCTTCATGGGGTGATTGGTGTTGCAGATATGTGTTTGCATGAAGATGCTGATAGAAGGCCTGTGATACGGGAAGTGGTTTCCGCTTTAACGTACCTGGAATCAGAGTATAATGACCCAGAAAAGCAGTGCAACAGAAGGGGTTCAAAGCCACCCACATTCTTCTACTCATCTCTTCGCATAAAAGAAAGTGGATTGGAAAAAGAACAGAAGAAACAGGAATTTCAGGGAGGCATTTGTCGTTATGCTGCAGATACTGGAAAGCGAATTGTTAGGATCCACAACAGAATGAGGCCGTTTTAA 885 0.4531 MLSPLHHQNLVTLIGYCCEPDHWLLVYEYMPLGSLENHLFDLHPSREPLDWNTRMKIASGVAKGLEYLHILGDRPAIFGDFKSSNILLGEGYHPKLSDIRMANFGRLCNSSDASTSVGTYGYCAPEYVVTGHLTPECNVYAFGMVLLELISGVKAIDKSRSPEPYHKWAQPIFKDSSELYRLVDPLLDGSYPVAWLHGVIGVADMCLHEDADRRPVIREVVSALTYLESEYNDPEKQCNRRGSKPPTFFYSSLRIKESGLEKEQKKQEFQGGICRYAADTGKRIVRIHNRMRPF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05792 294 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Viun3g05792 294 Gene3D Transferase(Phosphotransferase) domain 1 31 244 - -
Viun3g05792 294 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05792 294 SUPERFAMILY Protein kinase-like (PK-like) 2 236 IPR011009 -
Viun3g05792 294 Pfam Protein kinase domain 2 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g05792 294 PANTHER OS07G0668900 PROTEIN 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05792 Viun-Chr3 63115920 63116995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05792 1 227 Glycoside Hydrolase AT3G07070 51.304 7.32e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Viun3g05792 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05792 - - vun:114175570 616.305