Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05765 ATGTTCAGAATTTACCCCCGCACAACCCTTGGTTGTGCCGAGGTTTTCGAATTCACAACCCTAAAATGGAACCCTCTTCTCCAACACCAATTTCCTAAATTCCAGTTCTGCACTGCCACCTCCACCTCCACCTCCAACTCACGCTCTTTCGTGGTCTCGTACCTCGTCAACAACTGTGCCTTCTCCCAAGAAACCGCTCTCAAAGCTTCCCGCAATCTTTATTTTTCGAAACCCCAAAAACCTGATTCTGTTCTCTCCTTCTTCCGAAACCACGCCTTCTCCAACTCTCATATATCTCAAACCCTCCAAAAAAGCCCCGTGCTACTTTCATACAACGCCCAAAAGGTGCTGTTGCCAAAGTTTGAATTTTTGCGTTCCAAAGGTGCTTCATCCCTTGACATTATTCACACCGTTACCGCCTGCCCTAATTTTCTCCGACGAAGCTTGGAGAACCATATAATCCCAACATATGAATTTATTAGAGGGCTCCTTCAAAACTTTTTAACGGACAAACAAATCATTGATTTTGTGATTCTCAATCCTCCTTTACTTTATGAAAGCTGTGTGGCACCTAACCTCAAATTGTTGCTTGATAGTGGAGTTACCCACTCAAAAATTGTTAAATTGCTCCAGAGATGGCCTCGTGTACTCTACCTTGGCGACATTTCAAAGACAGTTCAGGAGTTGAAGCAAATGGGCTTCGATGCTTCACTTTATACTTTCTGCGTGGCGTTGCTTGCTAAAAGAACCGTAAACGAAAGCAAATGGGCCAAGAAGATTGACACTTATAAGAGGTGGGGATGGTCCCAAGAACAAGTTCTTCTAGCATTTAGGAAGCAGCCTTATTGTATGCTGTCATCCTGTGATAAAATTAATGCCGTGATGAGTTATTGGGTGGAGCAGGCAGGCTTCAATTCTGTGGATCTTGTCAAATCTCCTGGAGTTATTTTACTGAGTCTCCGAAAAAGGATTGCTCCTAGGGCTTGTGTCTTGCAGTTTCTTGTCTCAAAACGTCTGCTACGGAAGGATGCCAGCTTAACGGCACCATTTGTTCTGACTGAGAAGTTGTTCCTGGAAAACTATGTGAAACGTTTTAGGGAGGATTCTTCTCATCTGTTAAAGCTGTACACAGAAAATATGAGCCTTGGAAATGATAGGGATAAGGCTTGTATGTGA 1176 0.4354 MFRIYPRTTLGCAEVFEFTTLKWNPLLQHQFPKFQFCTATSTSTSNSRSFVVSYLVNNCAFSQETALKASRNLYFSKPQKPDSVLSFFRNHAFSNSHISQTLQKSPVLLSYNAQKVLLPKFEFLRSKGASSLDIIHTVTACPNFLRRSLENHIIPTYEFIRGLLQNFLTDKQIIDFVILNPPLLYESCVAPNLKLLLDSGVTHSKIVKLLQRWPRVLYLGDISKTVQELKQMGFDASLYTFCVALLAKRTVNESKWAKKIDTYKRWGWSQEQVLLAFRKQPYCMLSSCDKINAVMSYWVEQAGFNSVDLVKSPGVILLSLRKRIAPRACVLQFLVSKRLLRKDASLTAPFVLTEKLFLENYVKRFREDSSHLLKLYTENMSLGNDRDKACM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05765 391 Gene3D Transcription termination factor 3, mitochondrial 165 374 IPR038538 -
Viun3g05765 391 Gene3D Transcription termination factor 3, mitochondrial 58 164 IPR038538 -
Viun3g05765 391 PANTHER CGI-12 PROTEIN-RELATED 48 364 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 FunFam Mitochondrial transcription termination factor-like 149 369 - -
Viun3g05765 391 Pfam mTERF 193 357 IPR003690 GO:0003690|GO:0006355
Viun3g05765 391 Pfam mTERF 85 236 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05765 Viun-Chr3 62936961 62938706 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun3g05765 mTERF 9.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05765 K15032 - gmx:102667698 499.59