Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05743 ATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAACAGTGATAGAGGTATTCCCTGTGAGGTTGCCAGTGGCTGCAAAATCCTTCCTGGAGTACGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGTGCAGCCTTAAGTGCGAATGCTACACTAGCCAACACAAACATCTGCAATGGTAAAATAGGTGAAGAAATCCTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTAACCTCTTCGCCAAGTCTTTCAAAGTTGGACATACTATCATCTTCCCTCCCAAGTAGTTTGTCTTACCTTAGCTGCAGTCCTTCTACTACAAGTGACATCCTCGAATATGACTCTTGCACATTAAAATCCATGAGCGATCCTTCCAGAGGTGAAGGTTTTCTTAATGGTAAGGAAGTTCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTATTCTGTGCAATTTATGATGGCTTTAATGGACGAGATGCAGCCGATTTTCTAGCCGGTACCCTGTATGACACCATCATATCATACTTTAATAAGTTAATAGAGGAATTGGAGCCAGGTTCCATCAGAGCTTATAATGATGGGGGCTTGGATGAATCCCTGCAATGTAAGTTGAATGACAGTCTTATTTATCACGAAGATCAATCTATGGCAAGATATAAAGGAATAAATGATTCTAATCATGGATGCTATGCAAAGTGTAGTCCATGTACTAAATCAGAACTATCATGTGATCCATTTTCACAAGGGATACTTGATATCCTTGAACGTGCTATTAGTCAGGCAGAGAATGATTTCCTTTACATGGTGGAGCGGGAAATGGAGGAACGTCCTGATCTAGTTTCTATTGGATCTTGTGTTTTACTAGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTTTTGGCAACCTGCATTACAGGTTGCCGAATGGATAAGAGTGAGAGACTGAAGGCTATACAGCTTACAGATAATCACACTGTTGACAATGAAGTTGAAAGAGCTAGACTTCTGGCCGAACACCCCGATGATCCCAGGATCGTTATAGCAGGAAAAGTGAAAGGGAAACTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTTTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCACCATACATATCCACTCAACCATCACTAAATGTCCATAGAATCTCAAGCTCCGATCAATTTGTGATAGTAGGAAGTGATGGTTTATTTGACTTCTTCAGCAACGATGAGGCTGTGAAGCTTGTAGAGTGTTATATCTTGAGCACCCCTTTTGGTGATCCAGCAAAGTTTCTGATTGAGCAGCTTGTGGCTAGAGCAGCTGTTTCTGCCGGTTTAAGCATGGAAGAGTTGATGAACATTCCAGCTGGAAGGAGAAGGAAGTACCATGACGATGTGACCGTGATTGTGATCATGCTTGGGATGAATCAACGCACTTCAAAGGCATCAACTTGCATTTGA 1575 0.4159 MLSPEGELKISFGYKCNSDRGIPCEVASGCKILPGVRRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPNSFRKVTSSPSLSKLDILSSSLPSSLSYLSCSPSTTSDILEYDSCTLKSMSDPSRGEGFLNGKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIEELEPGSIRAYNDGGLDESLQCKLNDSLIYHEDQSMARYKGINDSNHGCYAKCSPCTKSELSCDPFSQGILDILERAISQAENDFLYMVEREMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCITGCRMDKSERLKAIQLTDNHTVDNEVERARLLAEHPDDPRIVIAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLKSPPYISTQPSLNVHRISSSDQFVIVGSDGLFDFFSNDEAVKLVECYILSTPFGDPAKFLIEQLVARAAVSAGLSMEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05743 524 PANTHER PROTEIN PHOSPHATASE 2C 144 509 IPR015655 GO:0004722|GO:0006470
Viun3g05743 524 Gene3D - 106 520 IPR036457 -
Viun3g05743 524 ProSiteProfiles PPM-type phosphatase domain profile. 137 511 IPR001932 -
Viun3g05743 524 FunFam Probable protein phosphatase 2C 40 117 520 - -
Viun3g05743 524 Pfam Protein phosphatase 2C 283 465 IPR001932 -
Viun3g05743 524 SMART PP2C_4 127 509 IPR001932 -
Viun3g05743 524 SUPERFAMILY PP2C-like 150 512 IPR036457 -
Viun3g05743 524 CDD PP2Cc 149 509 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05743 Viun-Chr3 62839623 62843134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05743 4 524 PP2C-type Phosphatase Gene Family AT3G16560 62.429 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05743 - - vun:114178627 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05743 3 62839623 62843134 Viun9g00183 9 1102309 1105982 PCT