Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05706 ATGAATTCCAACTACGGCCAATCCAACACGAACAAATCCCCCTCCGTTTCCCTCAACAACTTCAATTTCGATTTCGATCTTGGCATCGGATCCAACCGTCCCAAGTCCCTCAACGACCAGAAAAACCCCAAACCTTCCTATTCCACCACCACTACCACCACCTCTTCCTATTCCTATCAATATTCCTCCGCCCAACCCAACAAGCAACCCTCATGGACCCACCAACCCGCTCCCACTCAGACCACCGCCCTTCCCGGTGGCCCCCCCTCCATGGTCGGAGACATCTTCGGCAAAAGCTGGGGCACCACTCAACCTTCTGCCGCTTCCAAGAACATTGGGGTCGTTGATAAGAACCCTAATCTCTTCGGAGATTTGGTCAGTTCTGCTTTGGGCCAGGGTTCCAAGTCTACTGGTACCAATGTTCCTCTCAAAAACGCTACCCCAACCCCCAATAAAACCTCCTTTTCCATGGGAAACATGGCCAATTCTTTGCCCAAAACTGGTGCCACGCCACAGAGCAGTGCTAGTTGGGCATCATCTTCTGGGGGGTTTAGCGTGAATGCCAACAAAACCCCCAATCTTGGGGGTACTTCAATGAGAAACACGGGTAGTGGAATTGGAACCAGTTCTAATAACAAGGATCCTTTTAGTTCTTTGTCTGGTTTTGGATCCAAACAGTCTGCTACCCTTAATTCAGCTGCCAAAGGGCCGAAGGTTGCATCCAGGGATGATGGTTTTGGAGATTTCCAGAATGCTTCCAAATCGAGCTCGGATGGTTTTGGAGATTTTCAAAATGCTTCAAAACCGAGCTCAGCCGCGTTTTCGTCGGCTGCTTCTCCGGGGATTGATTTCAATTTTGCTGGATCTGCCGCTCCCACTCAGAATCCTGTTCAGAGATCAGGTGGTGGTGATGATCCGTTGAACATGTTTTTCACGGCGGCTTCCTCGCCTGCGGTGGGAGGCGCTGCTTCGGCCTCTGATGGATTTGGAGGACAGGACGATTGGGGTTTGGATTCGGAGTTTGGTGGGGGAGGCCATGATGTGGGTGGCACCACTACTGAGCTTGAGGGGCTGCCTCCTCCTCCTGCTGGGGTCTCTGGTTCCACTGCAAAAGGCAAGGGGATGGACAATTACAAGCAGGGACAGTTTGCTGATGCTATTAAGTGGCTTTCGTGGGCCATTGTTCTTCTAGAGAAAGCTGGGGATGCTACCGCCGTAGCTGAGGTTTTGTCATGCAGGTCTTCATGTTACAAAGAAGTCGGGGAGTATAAAAAGGCAGTGGCAGATTGTACCAAGATTCTTGAAAATGATGAAACCAATGTAGCTGTCCTGGTACAGCGTGCTCTGTTGTACGAGAGTATGGAAAAGTACAAACTTGGTTCTGAAGACCTTAGGACCGTGCTGAAGATTGATCCTAGTAATAGGATTGCTAGAAGCACCGTTCACCGGTTGGCTCAGATGGCTGGTTAG 1470 0.5054 MNSNYGQSNTNKSPSVSLNNFNFDFDLGIGSNRPKSLNDQKNPKPSYSTTTTTTSSYSYQYSSAQPNKQPSWTHQPAPTQTTALPGGPPSMVGDIFGKSWGTTQPSAASKNIGVVDKNPNLFGDLVSSALGQGSKSTGTNVPLKNATPTPNKTSFSMGNMANSLPKTGATPQSSASWASSSGGFSVNANKTPNLGGTSMRNTGSGIGTSSNNKDPFSSLSGFGSKQSATLNSAAKGPKVASRDDGFGDFQNASKSSSDGFGDFQNASKPSSAAFSSAASPGIDFNFAGSAAPTQNPVQRSGGGDDPLNMFFTAASSPAVGGAASASDGFGGQDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSTAKGKGMDNYKQGQFADAIKWLSWAIVLLEKAGDATAVAEVLSCRSSCYKEVGEYKKAVADCTKILENDETNVAVLVQRALLYESMEKYKLGSEDLRTVLKIDPSNRIARSTVHRLAQMAG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05706 489 MobiDBLite consensus disorder prediction 248 274 - -
Viun3g05706 489 PANTHER OS03G0340700 PROTEIN 1 488 - -
Viun3g05706 489 MobiDBLite consensus disorder prediction 132 274 - -
Viun3g05706 489 MobiDBLite consensus disorder prediction 1 26 - -
Viun3g05706 489 MobiDBLite consensus disorder prediction 1 106 - -
Viun3g05706 489 MobiDBLite consensus disorder prediction 33 86 - -
Viun3g05706 489 SUPERFAMILY TPR-like 371 481 IPR011990 GO:0005515
Viun3g05706 489 MobiDBLite consensus disorder prediction 287 308 - -
Viun3g05706 489 MobiDBLite consensus disorder prediction 132 234 - -
Viun3g05706 489 Gene3D Tetratricopeptide repeat domain 367 488 IPR011990 GO:0005515
Viun3g05706 489 SMART tpr_5 441 474 IPR019734 GO:0005515
Viun3g05706 489 SMART tpr_5 407 440 IPR019734 GO:0005515
Viun3g05706 489 SMART tpr_5 367 400 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05706 366 486 Calmodulin-binding Proteins AT3G25230 29.231 5.98e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05706 - - pvu:PHAVU_003G107800g 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05706 3 62582491 62587905 Viun3g05706 3 62582491 62587905 ECH