Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05703 ATGGTTCTTTTTCCATCTTTCGTGAATGGATTGGCAAGAACCGTGTCAATCAAGAAGGAGAAGAATTGTAAGAGGGAGGAAGATGGAAGGACAGCTGCAGAAGATTTGGCAAAGGAAGCAAGGAAGAGTGAACTGTTACTGACTTCATCCGGAGTTGTTAAGTCGACCAAGGCCAACAATTTTGCTTCTGTCTTCACTAATAGGGGCCGGAAAGGAGTGAATCAGGATCGTCTTCTTGTTTGGGAGGAATTTGGATGCCAACAAGACATTATGTTCTGTGGAGTTTTTGACGGGCATGGCCCTTGGGGACACTTTGTAGCAAAAAGGGTCAGGAAACTGGTGCCAGCAATTTTGCTCTGCAATTGGCAGGAAAATCTGGCTGCAACATCACTTGACCTAGATTTTAAGATGGAAGAAGACAGACATATCCATGGTTTGGACGTGTGGAAGCAGTCCTACGTCAAGACTTATGCTGCTGTTGATCAGGATCTGAAGCAGCAAACCGGGTTCGATTCATTTCTTAGTGGCACTACAGCATTGACAATTATCAAACAGGGTGAATATCTTATTACAGCAAACATAGGTGATTCTAGGGCTGTCTTGGCAACCACTTCAGAGGATGGCACATTAACTCCACATCAGCTTACCACTGACTTCAAGCCAAATTTACCACAGGAAGCTGAACGCATAACACAATGTAGAGGGCAGGTATTTAGTTTGGAAGATGAACCAGGAGTGTACAGGGTGTGGATGCCAAATGGTAAGCCACCAGGACTAGCAATATCAAGAGCTTTAGGAGATCACTGCATGAAGGACTTTGGACTAATCTCTGTGCCTGATGTCACACAAACAAAAATTACAAGCAGGGATCAATTTGTCATATTGGCAACAGATGGGGTATGGGATGTTATATCGAATCAGGAAGCAGTGGAGATTGTTTCTGCAACACCACATAAAGAAAAAGCAGCTCAAAAGCTGGTTAAATGCGCCATACGTGAATGGAAGAGGAAGAAAAGTGGCATTGCTATGGATGACATGTCAGCTATTTGCCTCTTCTTTCACTCCTTCTCTTCCCATCAACTCCCACCCACTAAAACTGTTGATTAA 1107 0.4381 MVLFPSFVNGLARTVSIKKEKNCKREEDGRTAAEDLAKEARKSELLLTSSGVVKSTKANNFASVFTNRGRKGVNQDRLLVWEEFGCQQDIMFCGVFDGHGPWGHFVAKRVRKLVPAILLCNWQENLAATSLDLDFKMEEDRHIHGLDVWKQSYVKTYAAVDQDLKQQTGFDSFLSGTTALTIIKQGEYLITANIGDSRAVLATTSEDGTLTPHQLTTDFKPNLPQEAERITQCRGQVFSLEDEPGVYRVWMPNGKPPGLAISRALGDHCMKDFGLISVPDVTQTKITSRDQFVILATDGVWDVISNQEAVEIVSATPHKEKAAQKLVKCAIREWKRKKSGIAMDDMSAICLFFHSFSSHQLPPTKTVD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05703 368 ProSiteProfiles PPM-type phosphatase domain profile. 61 353 IPR001932 -
Viun3g05703 368 Gene3D - 47 355 IPR036457 -
Viun3g05703 368 Pfam Protein phosphatase 2C 83 333 IPR001932 -
Viun3g05703 368 CDD PP2Cc 60 353 IPR001932 -
Viun3g05703 368 SMART PP2C_4 52 351 IPR001932 -
Viun3g05703 368 SUPERFAMILY PP2C-like 53 354 IPR036457 -
Viun3g05703 368 PANTHER PROTEIN PHOSPHATASE 41 351 IPR015655 GO:0004722|GO:0006470
Viun3g05703 368 FunFam Probable protein phosphatase 2C 34 52 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05703 Viun-Chr3 62560467 62562840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05703 1 354 PP2C-type Phosphatase Gene Family AT3G05640 58.028 3.37e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05703 - - gmx:100814087 657.907