Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05694 ATGGCTTCAACGGACGTCAGAGGAATTTTGACCGCTTTCAATCCTTCTCAGGACTTCTTCGCTATCACTGCCGGAGACGGTCGCGTCAAGATATGGGACACGCTGAGTGGCCAGGTCCAGACCGAGTTCGCAGATATTGCATCGACTCATTCAACAACTACGTCACAGAATAAATCTATTAACGGCCATCTTGCACTAGATTATACCTGCATCAAGTGGTTCTCCTTCGAAAGAAAGAGGAAACGGAAGCATGTATCCTCGTTGTTAGTACTTGGAACTGGTAGTGGTGATGTTCTCGCACTTGATGTTGATGCTGGTCATTTGAGTTGGAGAATTACTGACTGTCATCCCGGAGGTGTGAGAGCGATTGCATCTTCAGCAAACGTGTCAAGCATTTATACAGCTGGTGCAGATGGGATGGTATGTGCGATAGATTTCATGACAGGAAACCTGTTGGAGAAATTTAAGGCTTCTACCAAGGCGGTGTCCTGCATGTGTGTTTCTCCGGATGGGAAGACATTAGCTACTGCAGCTGCACAATTGAAGATTTTTAATTGCTCTGATCACAAAAAGATTCAAAAGTTCTCTGGTCATCCTGGTTCTATTCGATGCATGGTTTTCACTGAAGATGGCAAGTATATCCTCTCGTCCGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGGGTAGATGGTCCTAAAACGCAGTCAGCTAGTTGTGTTCTTGCGATGGAGCATCCTGCTGTCTTTCTTGATAGCAGGTGCATTGATAGTGCGGAGGATGACATGCCTGGCATATGTGTTTTGGCCATTTCAGAAATTGGCATTTGTTATTTATGGTTTGGTAATAGTATTGAAGAACTGCGTAATGCAAAAGCCACAAAAATATCATTATCTTTAGAAGACATGCCCTCCAGAAATTATAGAGGAACTCTGCCAGCAATATATGCTGCAAAATTACAAGGCATCCAGAAGCCAGCCTCTGGGCAAGTTTTTCTTGTTTATGGGTTGCTTGTAAAGCCATCATTCAGAAAAATTCTTGTGCATTCTGGTACAGATGTAAAGTTGAATGTCTCTCGTGATGGTGTTCTTCTACCAACTAGTCAAGCTCTTGTCAAATCTAAGAAGGGAGCAAATGCACAAACAGTTACTGCCCTAGACCGAGCTAATGCTGAGGATGCCTTGCTTCCGATTCCTAAGGTTTTTGATTCCCATGAAAACGAGAAAGAGAAAGCATTTCAAAAACCTTTGGACAAGGATATAATTGATGATTTGTGGAGAAGTACTAATGATGATTCTGTTGAGACGGAAGAAGATATGGCCCATAGTGAGGCTGATGACCTTTGCATGGAGGACCTGCTAAAAACACTAGGGATGCTTTCCAGTGAAAGTGAATATGCATCAAACATTAAACTTTGCTCTAAGTTGTTGAAGGGTATTGATGTGGAAGCTACTGTTCCAGTGAAAAAGATAAGAGCAGCTGTTTTGTCTATGGAGCCAAGCAAAGCATTCATGCTACTGGAAGCGTTACTGACTGCATGGGAATCAAGGTCATCTAGTGGAAAGTACATTCTTCCATGGATATACAGCATATTAGTGAATCATGCTCAAAATGTCATTGCTGAGGGATCTGATACACGTACGCTTGATACCTTAGAGAGGATTAGCAATTTTAGAGGGGCAGCTCTTCAGCCTTTGTTACAATTATCAGGTCGTCTCCAACTGGTGACATCACAGATTGACAAAGCCTCTCAGACTATAAGCCATTCGGGGCATGAACTCCAAGCGGAAGAAAGTGAAGAAGATGAAGATGAAACTAAGGATGAATATTATCACGAGGGAGATGATACTTCTGAAATAAGTACTGATGATGAAAGCTAG 1878 0.426 MASTDVRGILTAFNPSQDFFAITAGDGRVKIWDTLSGQVQTEFADIASTHSTTTSQNKSINGHLALDYTCIKWFSFERKRKRKHVSSLLVLGTGSGDVLALDVDAGHLSWRITDCHPGGVRAIASSANVSSIYTAGADGMVCAIDFMTGNLLEKFKASTKAVSCMCVSPDGKTLATAAAQLKIFNCSDHKKIQKFSGHPGSIRCMVFTEDGKYILSSAVGERYVAVWRVDGPKTQSASCVLAMEHPAVFLDSRCIDSAEDDMPGICVLAISEIGICYLWFGNSIEELRNAKATKISLSLEDMPSRNYRGTLPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKILVHSGTDVKLNVSRDGVLLPTSQALVKSKKGANAQTVTALDRANAEDALLPIPKVFDSHENEKEKAFQKPLDKDIIDDLWRSTNDDSVETEEDMAHSEADDLCMEDLLKTLGMLSSESEYASNIKLCSKLLKGIDVEATVPVKKIRAAVLSMEPSKAFMLLEALLTAWESRSSSGKYILPWIYSILVNHAQNVIAEGSDTRTLDTLERISNFRGAALQPLLQLSGRLQLVTSQIDKASQTISHSGHELQAEESEEDEDETKDEYYHEGDDTSEISTDDES 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05694 625 MobiDBLite consensus disorder prediction 585 625 - -
Viun3g05694 625 SMART WD40_4 148 185 IPR001680 GO:0005515
Viun3g05694 625 SMART WD40_4 188 228 IPR001680 GO:0005515
Viun3g05694 625 SMART WD40_4 3 33 IPR001680 GO:0005515
Viun3g05694 625 SMART WD40_4 105 145 IPR001680 GO:0005515
Viun3g05694 625 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 237 IPR011047 -
Viun3g05694 625 Gene3D - 143 258 IPR015943 GO:0005515
Viun3g05694 625 Gene3D - 6 142 IPR015943 GO:0005515
Viun3g05694 625 Pfam Dip2/Utp12 Family 483 576 IPR007148 -
Viun3g05694 625 ProSiteProfiles Trp-Asp (WD) repeats profile. 12 42 IPR001680 GO:0005515
Viun3g05694 625 Pfam WD domain, G-beta repeat 10 33 IPR001680 GO:0005515
Viun3g05694 625 Pfam WD domain, G-beta repeat 191 227 IPR001680 GO:0005515
Viun3g05694 625 PANTHER OS03G0300300 PROTEIN 4 624 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g05694 116 227 U-box Gene Family AT2G33340 28.448 6.48e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05694 K14546 - gmx:100815458 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05694 3 62510312 62517358 Viun3g05694 3 62510312 62517358 ECH